RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 MDH2P40926 338 aaKnown RBP17.94■□□□□ 0.46
TPM1-204ENST00000334895 ZNF45Q02386 682 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 ATPAF1Q5TC12 328 aaPredicted RBP17.94■□□□□ 0.46
TPM1-204ENST00000334895 PYHIN1Q6K0P9 492 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 BAIAP2L2Q6UXY1 529 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 C17orf107Q6ZR85 190 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 BPIFB2Q8N4F0 458 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 DYRK2Q92630 601 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 SDSLQ96GA7 329 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 SDHCQ99643 169 aaPredicted RBP17.94■□□□□ 0.46
TPM1-204ENST00000334895 DPCDQ9BVM2 203 aaPredicted RBP17.94■□□□□ 0.46
TPM1-204ENST00000334895 SRRQ9GZT4 340 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 BARX1Q9HBU1 254 aaPredicted RBP17.94■□□□□ 0.46
TPM1-204ENST00000334895 MYOZ1Q9NP98 299 aaPredicted RBP17.94■□□□□ 0.46
TPM1-204ENST00000334895 PLEKHJ1Q9NW61 149 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 LYPD2Q6UXB3 125 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 SHARPINQ9H0F6 387 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 SPACA1Q9HBV2 294 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 UBE2QL1A1L167 161 aa17.93■□□□□ 0.46
TPM1-204ENST00000334895 MEIOCA2RUB1 952 aa17.93■□□□□ 0.46
TPM1-204ENST00000334895 TPPPO94811 219 aa17.93■□□□□ 0.46
TPM1-204ENST00000334895 MELTFP08582 738 aa17.93■□□□□ 0.46
TPM1-204ENST00000334895 GSTP1P09211 210 aaKnown RBP17.93■□□□□ 0.46
TPM1-204ENST00000334895 PTBP1P26599 531 aaKnown RBP eCLIP17.93■□□□□ 0.465e-7■■■□□ 15.6
TPM1-204ENST00000334895 OR3A1P47881 315 aa17.93■□□□□ 0.46
TPM1-204ENST00000334895 PAN3Q58A45 887 aaKnown RBP17.93■□□□□ 0.46
TPM1-204ENST00000334895 PEG10Q86TG7 708 aaKnown RBP17.93■□□□□ 0.46
TPM1-204ENST00000334895 FAM216BQ8N7L0 139 aa17.93■□□□□ 0.46
TPM1-204ENST00000334895 ZNRF1Q8ND25 227 aa17.93■□□□□ 0.46
TPM1-204ENST00000334895 PPA2Q9H2U2 334 aa17.93■□□□□ 0.46
TPM1-204ENST00000334895 BEX4Q9NWD9 120 aaPredicted RBP17.93■□□□□ 0.46
TPM1-204ENST00000334895 FCN3O75636 299 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 DNASE1P24855 282 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 GIFP27352 417 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 GPR6P46095 362 aaPredicted RBP17.92■□□□□ 0.46
TPM1-204ENST00000334895 GUCA2AQ02747 115 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 DEFB113Q30KQ7 82 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 HACD4Q5VWC8 232 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 OR4S1Q8NGB4 309 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 RAB1CQ92928 201 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 TIMD4Q96H15 378 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 CHST6Q9GZX3 395 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 ZNF665Q9H7R5 613 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 CTSZQ9UBR2 303 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 AK3Q9UIJ7 227 aa17.92■□□□□ 0.46
TPM1-204ENST00000334895 CCDC168Q8NDH2 2452 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 ISPDA4D126 451 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 J3QRK9 145 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 SIGLEC5O15389 551 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 SSX5O60225 188 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 PDLIM4P50479 330 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 ZNF846Q147U1 533 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 DCDC5Q6ZRR9 648 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 DNM1P46Q6ZS02 220 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 ZNF561Q8N587 486 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 ASCC1Q8N9N2 400 aaKnown RBP17.91■□□□□ 0.46
TPM1-204ENST00000334895 PLPPR1Q8TBJ4 325 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 NUDCD2Q8WVJ2 157 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 HDHD3Q9BSH5 251 aaPredicted RBP17.91■□□□□ 0.46
TPM1-204ENST00000334895 WDR12Q9GZL7 423 aaKnown RBP17.91■□□□□ 0.46
TPM1-204ENST00000334895 DNTTIP1Q9H147 329 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 RABL2AQ9UBK7 228 aaPredicted RBP17.91■□□□□ 0.46
TPM1-204ENST00000334895 RABL2BQ9UNT1 228 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 TEX15Q9BXT5 2789 aa17.91■□□□□ 0.46
TPM1-204ENST00000334895 CEACAM18A8MTB9 384 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 SERPINE3A8MV23 424 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 MCRIP1C9JLW8 97 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 H3BUI4 141 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 CTDSPLO15194 276 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 TMPRSS2O15393 492 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 GLAP06280 429 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 DGCR2P98153 550 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 PITPNAQ00169 270 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 PNLIPRP3Q17RR3 467 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 PYDC2Q56P42 97 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 RNASE12Q5GAN4 147 aaKnown RBP17.9■□□□□ 0.46
TPM1-204ENST00000334895 FGFRL1Q8N441 504 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 MBD6Q96DN6 1003 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 KAAG1Q9UBP8 84 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 MAST4O15021 2626 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 K7N7A8 449 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 ADAM20O43506 726 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 IL13RA1P78552 427 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 ATXN7L3Q14CW9 347 aaPredicted RBP17.9■□□□□ 0.46
TPM1-204ENST00000334895 ARL6IP1Q15041 203 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 KCNJ8Q15842 424 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 TMEM155Q4W5P6 130 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 SHEQ5VZ18 495 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 Q6ZPA2 131 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 MUC20Q8N307 709 aaPredicted RBP17.9■□□□□ 0.46
TPM1-204ENST00000334895 OR52I2Q8NH67 350 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 C10orf105Q8TEF2 133 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 SNX22Q96L94 193 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 BPESC1Q9GZL8 116 aa17.9■□□□□ 0.46
TPM1-204ENST00000334895 NKX6-3A6NJ46 265 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 NDUFA2O43678 99 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 CA11O75493 328 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 TK1P04183 234 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 PRSS3P35030 304 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 PPP5CP53041 499 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms