RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 SELEP16581 610 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 MPV17LQ2QL34 196 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 ACOT6Q3I5F7 207 aaPredicted RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 DMRTA1Q5VZB9 504 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 TMEM123Q8N131 208 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 OR5L1Q8NGL2 311 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 MIEN1Q9BRT3 115 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 TMEM222Q9H0R3 208 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 ZNF665Q9H7R5 613 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 OR6C3Q9NZP0 311 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 GAB2Q9UQC2 676 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 C17orf105B2RV13 164 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 NKX2-1P43699 371 aaPredicted RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 RRADP55042 308 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 RPL15P61313 204 aaKnown RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 KCNMB1Q16558 191 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 ABCA11PQ4W5N1 156 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 NMSQ5H8A3 153 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 P4HA3Q7Z4N8 544 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 CISD2Q8N5K1 135 aaKnown RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 RASL10BQ96S79 203 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 GPER1Q99527 375 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 NKX2-4Q9H2Z4 354 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 UBE2ZQ9H832 354 aaPredicted RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 Q9N2K0 584 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 NXT1Q9UKK6 140 aaKnown RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 LAMP3Q9UQV4 416 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 LNP1A1A4G5 178 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 NPIPA5E9PKD4 350 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 TNFSF13O75888 250 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 HRASP01112 189 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 EPHA8P29322 1005 aaPredicted RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 RPL23P62829 140 aaKnown RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 IL24Q13007 206 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 PHLDA2Q53GA4 152 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 CXorf66Q5JRM2 361 aaPredicted RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 SAPCD1Q5SSQ6 148 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 C17orf78Q8N4C9 275 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 OR5D18Q8NGL1 313 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 ZNF721Q8TF20 911 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 TOMM40LQ969M1 308 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 FAM71F1Q96KD3 344 aaPredicted RBP6.75□□□□□ -1.33
CD46-201ENST00000322875 PCGF1Q9BSM1 259 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 RPRMQ9NS64 109 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 MED29Q9NX70 200 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 B3GAT1Q9P2W7 334 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 NPIPA1Q9UND3 350 aa6.75□□□□□ -1.33
CD46-201ENST00000322875 C3orf85A0A1B0GTC6 90 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 A0A1W2PNV4 684 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 H0YIG0 161 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 PHF1O43189 567 aaPredicted RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 ZNF205O95201 554 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 KLF8O95600 359 aaPredicted RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 DDAH2O95865 285 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 LCATP04180 440 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 UMODP07911 640 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 OMGP23515 440 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 RPL29P47914 159 aaKnown RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 TNFSF10P50591 281 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 SRPXP78539 464 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 TRA2AQ13595 282 aaKnown RBP eCLIP6.74□□□□□ -1.33
CD46-201ENST00000322875 NFATC4Q14934 902 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 DEFB110Q30KQ9 67 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 C9orf50Q5SZB4 431 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 H1FNTQ75WM6 255 aaPredicted RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 MRGPRGQ86SM5 289 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 MRPL41Q8IXM3 137 aaKnown RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 SELENOHQ8IZQ5 122 aaKnown RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 POC1BQ8TC44 478 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 DDIT4LQ96D03 193 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 MRGPRX4Q96LA9 322 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 PLEKHJ1Q9NW61 149 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 PRSS50Q9UI38 385 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 ZFP30Q9Y2G7 519 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 KIAA1324LA8MWY0 1029 aaPredicted RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 MPPED1O15442 326 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 SSSCA1O60232 199 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 KBTBD11O94819 623 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 GALR1P47211 349 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 ERVS71-1P61550 626 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 TPTE2P1Q5T6R2 138 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 CPEB2Q7Z5Q1 589 aaKnown RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 PRR22Q8IZ63 422 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 ZNF248Q8NDW4 579 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 ZCCHC14Q8WYQ9 949 aaKnown RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 ELOVL1Q9BW60 279 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 VSIRQ9H7M9 311 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 MSL2Q9HCI7 577 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 LANCL2Q9NS86 450 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 HRASLS2Q9NWW9 162 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 COLQQ9Y215 455 aaPredicted RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 FUT9Q9Y231 359 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 DUXBA0A1W2PPF3 345 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 NUPR1O60356 82 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 LILRA1O75019 489 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 CST7O76096 145 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 GLI4P10075 376 aa6.74□□□□□ -1.33
CD46-201ENST00000322875 CNN1P51911 297 aaKnown RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 UBE2NP61088 152 aaKnown RBP6.74□□□□□ -1.33
CD46-201ENST00000322875 ZNF154Q13106 437 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms