RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 MOB1AQ9H8S9 216 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 PLEKHJ1Q9NW61 149 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 PILRBQ9UKJ0 227 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 FREM2Q5SZK8 3169 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 BORCS7-ASMTA0A0B4J1R7 106 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 A0A1W2PNV4 684 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 SEC11BP0C7V7 166 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 HNRNPKP61978 463 aaKnown RBP eCLIP13.92□□□□□ -0.187e-6■□□□□ 8.5
CRAT-201ENST00000318080 COTL1Q14019 142 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 TCEAL6Q6IPX3 200 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 HIST1H2BLQ99880 126 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 GINS3Q9BRX5 216 aa13.92□□□□□ -0.18
CRAT-201ENST00000318080 SDK2Q58EX2 2172 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 TMEM238LA0A1B0GVL6 79 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 A0A1B0GX78 115 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 OR5H8P0DN80 308 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 FUT3P21217 361 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 RAB1AP62820 205 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 TAF9Q16594 264 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 PLPPR5Q32ZL2 321 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 AKR1C8PQ5T2L2 129 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 SPSB3Q6PJ21 355 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 MEX3BQ6ZN04 569 aaKnown RBP13.91□□□□□ -0.18
CRAT-201ENST00000318080 ZNF664Q8N3J9 261 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 TMEM217Q8N7C4 229 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 A0A087WZY1 265 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 ZNF724A8MTY0 619 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 LMO7DNF2Z398 122 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 K7N7A8 449 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 SPRY1O43609 319 aaPredicted RBP13.91□□□□□ -0.18
CRAT-201ENST00000318080 ZNF43P17038 809 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 C17orf82Q86X59 251 aaPredicted RBP13.91□□□□□ -0.18
CRAT-201ENST00000318080 FOXD3Q9UJU5 478 aaPredicted RBP13.91□□□□□ -0.18
CRAT-201ENST00000318080 PIGLQ9Y2B2 252 aa13.91□□□□□ -0.18
CRAT-201ENST00000318080 IGHV1OR21-1A0A087WYE8 117 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 TRBV11-1A0A0K0K1C0 115 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 SRP19P09132 144 aaKnown RBP13.9□□□□□ -0.18
CRAT-201ENST00000318080 ATP6V0CP27449 155 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 ZNF41P51814 821 aaPredicted RBP13.9□□□□□ -0.18
CRAT-201ENST00000318080 AARDQ4LEZ3 155 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 FAM180AQ6UWF9 173 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 ARV1Q9H2C2 271 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 ZNF160Q9HCG1 818 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 FGF21Q9NSA1 209 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 TP53TG5Q9Y2B4 290 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 TNRC6BQ9UPQ9 1833 aaKnown RBP13.9□□□□□ -0.18
CRAT-201ENST00000318080 CST7O76096 145 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 CTSDP07339 412 aaPredicted RBP13.9□□□□□ -0.18
CRAT-201ENST00000318080 MAS1LP35410 378 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 PTGDSP41222 190 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 RAC1P63000 192 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 NFAM1Q8NET5 270 aaPredicted RBP13.9□□□□□ -0.18
CRAT-201ENST00000318080 SLC25A31Q9H0C2 315 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 METTL9Q9H1A3 318 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 GPR173Q9NS66 373 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 ANXA10Q9UJ72 324 aa13.9□□□□□ -0.18
CRAT-201ENST00000318080 IGHV3-15A0A0B4J1V0 119 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 SERPINE3A8MV23 424 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 E5RGE8 158 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 CD55P08174 381 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 MMP7P09237 267 aaPredicted RBP13.89□□□□□ -0.19
CRAT-201ENST00000318080 PNLIPP16233 465 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 EPHA1P21709 976 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 CLDN17P56750 224 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 WDR25Q64LD2 544 aaPredicted RBP13.89□□□□□ -0.19
CRAT-201ENST00000318080 AK3Q9UIJ7 227 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 NSG2Q9Y328 171 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 R4GN57 208 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 COL5A1P20908 1838 aaPredicted RBP13.89□□□□□ -0.19
CRAT-201ENST00000318080 NSG1A0A0A6YYJ2 146 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 TIAF1O95411 115 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 CSNK1A1P48729 337 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 TMEM187Q14656 261 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 HLA-BQ31612 363 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 HIKESHIQ53FT3 197 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 FBXW12Q6X9E4 464 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 NECAP1Q8NC96 275 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 OR2AE1Q8NHA4 323 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 SLC7A11Q9UPY5 501 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 KCNIP3Q9Y2W7 256 aa13.89□□□□□ -0.19
CRAT-201ENST00000318080 CCDC187A0A096LP49 1063 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 ZNF850A8MQ14 1090 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 SP9P0CG40 484 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 LMO1P25800 156 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 ICAM4Q14773 271 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 SNAI3Q3KNW1 292 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 ANKRD37Q7Z713 158 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 TMEM171Q8WVE6 324 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 RTN4IP1Q8WWV3 396 aaPredicted RBP13.88□□□□□ -0.19
CRAT-201ENST00000318080 ZNF837Q96EG3 531 aaPredicted RBP13.88□□□□□ -0.19
CRAT-201ENST00000318080 FAM210BQ96KR6 192 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 TM2D1Q9BX74 207 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 CHRNA10Q9GZZ6 450 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 SMCO3A2RU48 225 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 GPR137BO60478 399 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 OR2J2O76002 312 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 TNFRSF9Q07011 255 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 D2HGDHQ8N465 521 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 OR6X1Q8NH79 312 aa13.88□□□□□ -0.19
CRAT-201ENST00000318080 ZNF501Q96CX3 271 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms