RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 LINC01555Q8NAE3 123 aa12.1□□□□□ -0.47
CLCN6-201ENST00000312413 OR10AC1Q8NH08 325 aa12.1□□□□□ -0.47
CLCN6-201ENST00000312413 RALYQ9UKM9 306 aaKnown RBP12.1□□□□□ -0.47
CLCN6-201ENST00000312413 UFC1Q9Y3C8 167 aa12.1□□□□□ -0.47
CLCN6-201ENST00000312413 C7orf66A4D0T2 115 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 IER3P46695 156 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 R3HDM4Q96D70 268 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 NUP205Q92621 2012 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 C1QAP02745 245 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 CD40P25942 277 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 CBLN3Q6UW01 205 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 LYPD8Q6UX82 237 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 TBX15Q96SF7 602 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 CLEC5AQ9NY25 188 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 TNFSF18Q9UNG2 199 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 HELTA6NFD8 242 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 IFITM10A6NMD0 228 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 SMPD2O60906 423 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 POU2F2P09086 479 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 COL8A1P27658 744 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 OR1B1Q8NGR6 318 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 LRRC29Q8WV35 223 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 GRAMD2BQ96HH9 432 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 IER2Q9BTL4 223 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 MPC1Q9Y5U8 109 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 TRPM3Q9HCF6 1732 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-201ENST00000312413 hADV38S2A0JD32 116 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 PPYP01298 95 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 FAM157CP0CG43 387 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 SRSF9Q13242 221 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLCN6-201ENST00000312413 CD226Q15762 336 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 TP53I13Q8NBR0 393 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-201ENST00000312413 OR1L1Q8NH94 360 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 VSTM2AQ8TAG5 236 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 ORM1P02763 201 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 RPL30P62888 115 aaKnown RBP12.09□□□□□ -0.47
CLCN6-201ENST00000312413 DGAT2L7PQ6IED9 249 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 ZNF547Q8IVP9 402 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 GAPTQ8N292 157 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 MRPL30Q8TCC3 161 aaKnown RBP12.09□□□□□ -0.47
CLCN6-201ENST00000312413 OIT3Q8WWZ8 545 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 ABHD14AQ9BUJ0 271 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 SMDT1Q9H4I9 107 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 OR6C3Q9NZP0 311 aa12.09□□□□□ -0.47
CLCN6-201ENST00000312413 PLCH1Q4KWH8 1693 aa12.08□□□□□ -0.47
CLCN6-201ENST00000312413 CHD4Q14839 1912 aa12.08□□□□□ -0.47
CLCN6-201ENST00000312413 MS4A18H0YCH9 400 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 FFAR1O14842 300 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 FZD5Q13467 585 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 MS4A18Q3C1V0 323 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 KHDC3LQ587J8 217 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 TMEM255AQ5JRV8 349 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 PRSS41Q7RTY9 318 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 PHF7Q9BWX1 381 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-201ENST00000312413 RCC2Q9P258 522 aaKnown RBP12.08□□□□□ -0.48
CLCN6-201ENST00000312413 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 OR4C45A6NMZ5 311 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 DIRC3C9JPN6 131 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 HAND1O96004 215 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 FOXO1Q12778 655 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 DOLPP1Q86YN1 238 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 OR6X1Q8NH79 312 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 RGP1Q92546 391 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-201ENST00000312413 ONECUT1Q9UBC0 465 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 NUP98P52948 1817 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 ISLRO14498 428 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 TNFSF15O95150 251 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 COL19A1Q14993 1142 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 OVCH2Q7RTZ1 564 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 ANKRD33Q7Z3H0 272 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 NPEPL1Q8NDH3 523 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 OR5A2Q8NGI9 324 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 OR1L3Q8NH93 324 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 APCSP02743 223 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 METAP1P53582 386 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 FAM3BP58499 235 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-201ENST00000312413 NRIP2Q9BQI9 281 aa12.08□□□□□ -0.48
CLCN6-201ENST00000312413 CTXND1A0A1B0GTU2 59 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 MESTQ5EB52 335 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 PTP4A1Q93096 173 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 C10orf35Q96D05 121 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 ZNF764Q96H86 408 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-201ENST00000312413 HOXA6P31267 233 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 DEFB109BQ30KR1 87 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 C8orf82Q6P1X6 216 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-201ENST00000312413 OR52L2PQ8NGH6 319 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 LILRB1Q8NHL6 650 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-201ENST00000312413 SSMEM1Q8WWF3 244 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 ASB10Q8WXI3 467 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 CA10Q9NS85 328 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 SRSF10O75494 262 aaKnown RBP12.07□□□□□ -0.48
CLCN6-201ENST00000312413 CCL7P80098 99 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 WDR74Q6RFH5 385 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-201ENST00000312413 LYZL2Q7Z4W2 148 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 ADAD2Q8NCV1 583 aaKnown RBP12.07□□□□□ -0.48
CLCN6-201ENST00000312413 ALX4Q9H161 411 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms