RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SEC61A1P61619 476 aaKnown RBP18.06■□□□□ 0.48
ATG4D-201ENST00000309469 FAM27E3Q08E93 113 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 NRIP2Q9BQI9 281 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 DPCDQ9BVM2 203 aaPredicted RBP18.06■□□□□ 0.48
ATG4D-201ENST00000309469 CXXC4Q9H2H0 198 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 Q9N2K0 584 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 IGHV3-64DA0A0J9YX35 117 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 HS3ST1O14792 307 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 DEGS1O15121 323 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 CTSDP07339 412 aaPredicted RBP18.06■□□□□ 0.48
ATG4D-201ENST00000309469 GMFBP60983 142 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 ZNF680Q8NEM1 530 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 GTF3AQ92664 365 aaKnown RBP18.06■□□□□ 0.48
ATG4D-201ENST00000309469 A0A0B4J2A0 478 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 M0R233 179 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 ZNF205O95201 554 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 MPC2O95563 127 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 KNG1P01042 644 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 ACAA1P09110 424 aaPredicted RBP18.05■□□□□ 0.48
ATG4D-201ENST00000309469 RPS2P15880 293 aaKnown RBP18.05■□□□□ 0.48
ATG4D-201ENST00000309469 FCGR2CP31995 323 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 SLC9A3R2Q15599 337 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 Q6P435 159 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 Q6ZR03 302 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 MRGPRGQ86SM5 289 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 PDCD10Q9BUL8 212 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 RIMS4Q9H426 269 aaPredicted RBP18.05■□□□□ 0.48
ATG4D-201ENST00000309469 SHPKQ9UHJ6 478 aa18.05■□□□□ 0.48
ATG4D-201ENST00000309469 FXYD6-FXYD2A0A087WZ82 144 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 CD8AP01732 235 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 CRYAAP02489 173 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 SORDQ00796 357 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 RBM39Q14498 530 aaKnown RBP18.04■□□□□ 0.48
ATG4D-201ENST00000309469 OPCMLQ14982 345 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 C1QTNF12Q5T7M4 302 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 RGS7BPQ6MZT1 257 aaPredicted RBP18.04■□□□□ 0.48
ATG4D-201ENST00000309469 SPERTQ8NA61 448 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 RDH5Q92781 318 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 FXYD6Q9H0Q3 95 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 ACACAQ13085 2346 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 ARPC5O15511 151 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 NOS1APO75052 506 aaPredicted RBP18.04■□□□□ 0.48
ATG4D-201ENST00000309469 ZNF44P15621 663 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 GLP1RP43220 463 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 COQ8AQ8NI60 647 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 SEC22AQ96IW7 307 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 MSL2Q9HCI7 577 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 SH3BGRL2Q9UJC5 107 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 SPEF1Q9Y4P9 236 aa18.04■□□□□ 0.48
ATG4D-201ENST00000309469 NXPH2O95156 264 aa18.03■□□□□ 0.48
ATG4D-201ENST00000309469 SLC34A2O95436 690 aa18.03■□□□□ 0.48
ATG4D-201ENST00000309469 ZNF728P0DKX0 622 aa18.03■□□□□ 0.48
ATG4D-201ENST00000309469 IGSF11Q5DX21 431 aa18.03■□□□□ 0.48
ATG4D-201ENST00000309469 C11orf53Q8IXP5 236 aa18.03■□□□□ 0.48
ATG4D-201ENST00000309469 TUBD1Q9UJT1 453 aa18.03■□□□□ 0.48
ATG4D-201ENST00000309469 A0A1B0GWJ7 208 aa18.02■□□□□ 0.48
ATG4D-201ENST00000309469 RFPL4AA6NLU0 287 aa18.02■□□□□ 0.48
ATG4D-201ENST00000309469 FAM25EA8MYX2 175 aa18.02■□□□□ 0.48
ATG4D-201ENST00000309469 RFPL4AL1F8VTS6 287 aa18.02■□□□□ 0.48
ATG4D-201ENST00000309469 FGL1Q08830 312 aa18.02■□□□□ 0.48
ATG4D-201ENST00000309469 ANKRD55Q3KP44 614 aa18.02■□□□□ 0.48
ATG4D-201ENST00000309469 POC1AQ8NBT0 407 aa18.02■□□□□ 0.48
ATG4D-201ENST00000309469 MRPL30Q8TCC3 161 aaKnown RBP18.02■□□□□ 0.48
ATG4D-201ENST00000309469 TOMM40LQ969M1 308 aa18.02■□□□□ 0.48
ATG4D-201ENST00000309469 TRAV14DV4A0A0A6YYC5 116 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 TRDCB7Z8K6 153 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 IFNA7P01567 189 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 FXYD4P59646 89 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 RBPJQ06330 500 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 ZNF146Q15072 292 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 MSMPQ1L6U9 139 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 MOB3AQ96BX8 217 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 TLNRD1Q9H1K6 362 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 ELOVL5Q9NYP7 299 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 PRR13Q9NZ81 148 aa18.02■□□□□ 0.47
ATG4D-201ENST00000309469 TRBV6-6A0A0A6YYG2 114 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 KIR2DS1A0A191URI9 304 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 OR2H2O95918 312 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 SCTP09683 121 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 SERPINF1P36955 418 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 KIR2DS4P43632 304 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 KIR2DS1Q14954 304 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 C22orf34Q6ZV56 151 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 SGPP2Q8IWX5 399 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 HES4Q9HCC6 221 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 RAB18Q9NP72 206 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 DUSP13Q9UII6 198 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 ATP23Q9Y6H3 246 aa18.01■□□□□ 0.47
ATG4D-201ENST00000309469 ERVH48-1M5A8F1 160 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 IFNA2P01563 188 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 ZNF250P15622 560 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 AADACP22760 399 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 S100A11P31949 105 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 GLRXP35754 106 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 UCP3P55916 312 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 NKX6-1P78426 367 aaPredicted RBP18■□□□□ 0.47
ATG4D-201ENST00000309469 EXOSC2Q13868 293 aaKnown RBP18■□□□□ 0.47
ATG4D-201ENST00000309469 SPIN3Q5JUX0 258 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 GSG1LQ6UXU4 331 aa18■□□□□ 0.47
ATG4D-201ENST00000309469 C20orf204Q6ZNR8 217 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms