RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CYTIPO60759 359 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 RBM11P57052 281 aaKnown RBP9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 RPS11P62280 158 aaKnown RBP eCLIP9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 TNFAIP6P98066 277 aaPredicted RBP9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 SNAI3Q3KNW1 292 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZNF528Q3MIS6 628 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 SLC36A1Q7Z2H8 476 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 TMEM105Q8N8V8 129 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 LHX4Q969G2 390 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 C20orf24Q9BUV8 137 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 GNG13Q9P2W3 67 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 PSG11Q9UQ72 335 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 THADAQ6YHU6 1953 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 NPIPB7O75200 414 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 TAGLN2P37802 199 aaKnown RBP9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 HES1Q14469 280 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 VAX1Q5SQQ9 334 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 S100PBPQ96BU1 408 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 NTNG2Q96CW9 530 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZIC3O60481 467 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 ASCL1P50553 236 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 LIAT1Q6ZQX7 453 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 PHYHIPLQ96FC7 376 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 MS4A3Q96HJ5 214 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 COMMD5Q9GZQ3 224 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 TTC28Q96AY4 2481 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 ICE1Q9Y2F5 2266 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 LOC102723996A0A087X1L8 192 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 SCO1O75880 301 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 LPAR6P43657 344 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 GAS1P54826 345 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 IL13RA2Q14627 380 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR2C3Q8N628 320 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 UMAD1C9J7I0 102 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 SUB1P53999 127 aaKnown RBP eCLIP9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 P2RX3P56373 397 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 TRAT1Q6PIZ9 186 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 SEZ6L2Q6UXD5 910 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 TBC1D26Q86UD7 250 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 TMEM123Q8N131 208 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 RAB40CQ96S21 281 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 PFDN5Q99471 154 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 RHOFQ9HBH0 211 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 FBXL17Q9UF56 701 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 PRSS50Q9UI38 385 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZNHIT1O43257 154 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 GALR2O43603 387 aaPredicted RBP9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 IGFBP7Q16270 282 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 CEACAM21Q3KPI0 293 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 HIST2H3PS2Q5TEC6 136 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 C17orf78Q8N4C9 275 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 FADS6Q8N9I5 356 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR10Z1Q8NGY1 313 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 SSX3Q99909 188 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR2D2Q9H210 308 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 CACNG5Q9UF02 275 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 CACFD1Q9UGQ2 172 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 FREM3P0C091 2139 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 IGHV3-43A0A0B4J1X8 118 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 FAM24AA6NFZ4 105 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 RPL36A-HNRNPH2H7BZ11 118 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 NDUFB3O43676 98 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 HAND1O96004 215 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 IGHV3-43DP0DP04 118 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 MST1P26927 711 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 HTD2P86397 168 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 SLC25A53Q5H9E4 307 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 GAPTQ8N292 157 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 AQP3Q92482 292 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 TMEM54Q969K7 222 aa9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 PINX1Q96BK5 328 aaKnown RBP9.93□□□□□ -0.82
PCDHGC3-201ENST00000308177 DHRS7CA6NNS2 312 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 J3QRE1 110 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 CNIH1O95406 144 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 RPS16P62249 146 aaKnown RBP9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZFP36L1Q07352 338 aaKnown RBP9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 C19orf57Q0VDD7 668 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 ADIRFQ15847 76 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 Q3ZCU0 254 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 LRRC10Q5BKY1 277 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 AVPI1Q5T686 147 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 S100A7AQ86SG5 101 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 NR2C2APQ86WQ0 139 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZBTB44Q8NCP5 570 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 FGF11Q92914 225 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 MRPL24Q96A35 216 aaKnown RBP9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 MSL2Q9HCI7 577 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 FCGR3AP08637 254 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 VDAC1P21796 283 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 TMEM33P57088 247 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 KCNIP4Q6PIL6 250 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR5C1Q8NGR4 320 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 SLC39A7Q92504 469 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 SLC35E1Q96K37 410 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZNF488Q96MN9 340 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 CCL28Q9NRJ3 127 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 CA11O75493 328 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 COX5AP20674 150 aa9.92□□□□□ -0.82
PCDHGC3-201ENST00000308177 POLR2GP62487 172 aaKnown RBP eCLIP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms