RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 SNAI3Q3KNW1 292 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 FNDC7Q5VTL7 733 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 DCAF12L2Q5VW00 463 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 IGF2-ASQ6U949 168 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 LINC00596Q86U02 117 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF596Q8TC21 504 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 AMELYQ99218 206 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 RASL11BQ9BPW5 248 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 POFUT1Q9H488 388 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 IL36GQ9NZH8 169 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 PTPRQQ9UMZ3 2332 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 A0A1B0GV50 99 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 NKX2-1P43699 371 aaPredicted RBP7.99□□□□□ -1.13
PTPRE-202ENST00000306042 SSBP1Q04837 148 aaKnown RBP7.99□□□□□ -1.13
PTPRE-202ENST00000306042 AESQ08117 197 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 XAF1Q6GPH4 301 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 SLC38A6Q8IZM9 456 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 OR51A4Q8NGJ6 313 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF714Q96N38 554 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 SULT4A1Q9BR01 284 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 MFFQ9GZY8 342 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 MAB21L2Q9Y586 359 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 COL4A4P53420 1690 aaPredicted RBP7.99□□□□□ -1.13
PTPRE-202ENST00000306042 A8MXE2 369 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 DAOP14920 347 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 AADACP22760 399 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 DHODHQ02127 395 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 OR8G2PQ6IF36 304 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 ARRDC1Q8N5I2 433 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 MARCH1Q8TCQ1 289 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 NEIL1Q96FI4 390 aaPredicted RBP7.99□□□□□ -1.13
PTPRE-202ENST00000306042 ADTRPQ96IZ2 230 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 ADGRG7Q96K78 797 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 CITED4Q96RK1 184 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 TAF9BQ9HBM6 251 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 CBLN4Q9NTU7 201 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 METRNQ9UJH8 293 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 A0A0G2JNJ9 132 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 THY1P04216 161 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 C17orf107Q6ZR85 190 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 NAA40Q86UY6 237 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 OR5H6Q8NGV6 325 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 Q9UFV3 132 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 NCOR2Q9Y618 2525 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 GUCA2AQ02747 115 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 PIGYQ3MUY2 71 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 FAM122BQ7Z309 247 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 NRARPQ7Z6K4 114 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 POM121L2Q96KW2 1035 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM56Q96MV1 263 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 SUCNR1Q9BXA5 334 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 C20orf85Q9H1P6 137 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 WDR13Q9H1Z4 485 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 PLSCR4Q9NRQ2 329 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 KCNIP2Q9NS61 270 aa7.99□□□□□ -1.13
PTPRE-202ENST00000306042 HELZP42694 1942 aaKnown RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 LOC105371242A0A075B767 164 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 KRASP01116 189 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 CRYBB2P43320 205 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 KIR3DL2P43630 455 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 SSX1Q16384 188 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 SUMF2Q8NBJ7 301 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 OR4S1Q8NGB4 309 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 LILRB4Q8NHJ6 448 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 PECRQ9BY49 303 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM200CA6NKL6 621 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF716A6NP11 495 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 ADAM11O75078 769 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 NCCRP1Q6ZVX7 275 aaPredicted RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 LRRTM1Q86UE6 522 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 SPAG16Q8N0X2 631 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM217Q8N7C4 229 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 TERB2Q8NHR7 220 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 STARD4Q96DR4 205 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 HYLS1Q96M11 299 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 ACACBO00763 2458 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 MEIOCA2RUB1 952 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 ST8SIA3O43173 380 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 PMELP40967 661 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 ENDOGQ14249 297 aaKnown RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 GGNQ86UU5 652 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM230Q96A57 120 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 SLC35D1Q9NTN3 355 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM106BQ9NUM4 274 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 PPIAL4CA0A0B4J2A2 164 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 MBD3L4A6NDZ8 208 aaPredicted RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 MBD3L3A6NE82 208 aaPredicted RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 MBD3L5A6NJ08 208 aaPredicted RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 TSPAN4O14817 238 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 CTAG2O75638 210 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 ARG1P05089 322 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 PPIAL4GP0DN37 164 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 KIR2DL2P43627 348 aaPredicted RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 MBD3L2Q8NHZ7 208 aaPredicted RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 ZFAND2BQ8WV99 257 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF837Q96EG3 531 aaPredicted RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 GON7Q9BXV9 100 aa7.98□□□□□ -1.13
PTPRE-202ENST00000306042 EIF5A2Q9GZV4 153 aaKnown RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 C11orf54Q9H0W9 315 aaPredicted RBP7.98□□□□□ -1.13
PTPRE-202ENST00000306042 MRPS18AQ9NVS2 196 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms