RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 AADACP22760 399 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 TAS2R31P59538 309 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 PRDX4Q13162 271 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 OR52M1Q8NGK5 317 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 EXTL1Q92935 676 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 USB1Q9BQ65 265 aaKnown RBP13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 DBX1A6NMT0 343 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 FOXI3A8MTJ6 420 aaPredicted RBP13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 SERPINA7P05543 415 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 TBPP20226 339 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 MEOX1P50221 254 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 ZNF528Q3MIS6 628 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 ARRDC1Q8N5I2 433 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 OR4A4PQ8NGN8 299 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 TTTY12Q9BZ98 90 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 FBXL17Q9UF56 701 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 AMDHD2Q9Y303 409 aa13.47□□□□□ -0.25
CHAF1A-201ENST00000301280 A0A087WZY1 265 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 LOC102723996A0A087X1L8 192 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 NTN3O00634 580 aaPredicted RBP13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 ERGIC1Q969X5 290 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 FAM234AQ9H0X4 552 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 COA4Q9NYJ1 87 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 ABI3Q9P2A4 366 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 AKAP13Q12802 2813 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 TMEM265A0A087WTH1 108 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 A0A1W2PNU3 283 aaPredicted RBP13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 ZNF716A6NP11 495 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 CELA3BP08861 270 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 FPR2P25090 351 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 ALDH3B1P43353 468 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 NPBWR1P48145 328 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 TMEM33P57088 247 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 B2MP61769 119 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 PDZK1IP1Q13113 114 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 SSPNQ14714 243 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 INTS12Q96CB8 462 aaKnown RBP13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 SCGB3A2Q96PL1 93 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 FBXO7Q9Y3I1 522 aa13.46□□□□□ -0.25
CHAF1A-201ENST00000301280 ZGRF1Q86YA3 2104 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 ATXN7O15265 892 aaPredicted RBP13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 SYNGR3O43761 229 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 MT-CO3P00414 261 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 APOC1P02654 83 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 CBR1P16152 277 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 FABP6P51161 128 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 POLR2GP62487 172 aaKnown RBP eCLIP13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 C12orf57Q99622 126 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 BCO1Q9HAY6 547 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 FAM86C1Q9NVL1 165 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 PPP1R3CQ9UQK1 317 aa13.46□□□□□ -0.26
CHAF1A-201ENST00000301280 FAM24AA6NFZ4 105 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 SSSCA1O60232 199 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 WDR1O75083 606 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 FCGR3AP08637 254 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 FAM53AQ6NSI3 398 aaPredicted RBP13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 Q6ZRG5 221 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 WDR5BQ86VZ2 330 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 ZNF695Q8IW36 515 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 DEFB124Q8NES8 71 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 PIK3IP1Q96FE7 263 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 C2orf50Q96LR7 162 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 ZNF286AQ9HBT8 521 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 C1orf123Q9NWV4 160 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 MLXQ9UH92 298 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 MEMO1Q9Y316 297 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 SMG1Q96Q15 3661 aaKnown RBP13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 RHBDL1O75783 438 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 SNRNP70P08621 437 aaKnown RBP13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 HIST1H3AP68431 136 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 HIST2H3PS2Q5TEC6 136 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 HIST2H3AQ71DI3 136 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 TMEM54Q969K7 222 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 TAAR9Q96RI9 348 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 SH2D2AQ9NP31 389 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 SLC2A9Q9NRM0 540 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 RYDENQ9NUL5 291 aaKnown RBP13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 NECAP2Q9NVZ3 263 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 TREM2Q9NZC2 230 aa13.45□□□□□ -0.26
CHAF1A-201ENST00000301280 NEURL1O76050 574 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 KCNJ3P48549 501 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 B3GALT5-AS1P59052 145 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 FAM76BQ5HYJ3 339 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 RFESDQ8TAC1 157 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 STOML3Q8TAV4 291 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 FAM213BQ8TBF2 198 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 FOXD3Q9UJU5 478 aaPredicted RBP13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 SERPINE3A8MV23 424 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 OR8U9P0C7N5 309 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 OR13C7P0DN81 318 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 CYCSP99999 105 aaKnown RBP13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 TMEM182Q6ZP80 229 aaPredicted RBP13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 MKXQ8IYA7 352 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 Q96M66 194 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 SH3BGRL3Q9H299 93 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 RELNP78509 3460 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 WNK2Q9Y3S1 2297 aa13.44□□□□□ -0.26
CHAF1A-201ENST00000301280 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms