RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 TRA2AQ13595 282 aaKnown RBP eCLIP9.55□□□□□ -0.88
SNX20-201ENST00000300590 RTL6Q6ICC9 239 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 SNIP1Q8TAD8 396 aaKnown RBP9.55□□□□□ -0.88
SNX20-201ENST00000300590 RPUSD4Q96CM3 377 aaKnown RBP9.55□□□□□ -0.88
SNX20-201ENST00000300590 SYT3Q9BQG1 590 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 CERS4Q9HA82 394 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 ZNF160Q9HCG1 818 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 SERINC1Q9NRX5 453 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 SDK2Q58EX2 2172 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 A0A1B0GW64 132 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 ADAM20O43506 726 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 CYB5R3P00387 301 aaPredicted RBP9.55□□□□□ -0.88
SNX20-201ENST00000300590 HNRNPA1P09651 372 aaKnown RBP eCLIP9.55□□□□□ -0.88
SNX20-201ENST00000300590 WNT5AP41221 380 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 MLF1P58340 268 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 OR5I1Q13606 314 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 TESK1Q15569 626 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 FAM90A2PQ658T7 463 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 DOK3Q7L591 496 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 PCGF1Q9BSM1 259 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 VSIRQ9H7M9 311 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 PLEKHF2Q9H8W4 249 aa9.55□□□□□ -0.88
SNX20-201ENST00000300590 A0A1B0GU03 582 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 A0A1B0GUS0 222 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 OR2J2O76002 312 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 IFI6P09912 130 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 ARL6IP1Q15041 203 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 IZUMO4Q1ZYL8 232 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 ZNF787Q6DD87 383 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 ZNF407Q9C0G0 2248 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 PPP5D1E7EU14 171 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 CHST1O43916 411 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 TMEM50AO95807 157 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 RPLP1P05386 114 aaKnown RBP9.54□□□□□ -0.88
SNX20-201ENST00000300590 ELLP55199 621 aaPredicted RBP9.54□□□□□ -0.88
SNX20-201ENST00000300590 GFERP55789 205 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 RPS18P62269 152 aaKnown RBP9.54□□□□□ -0.88
SNX20-201ENST00000300590 TMEM267Q0VDI3 215 aaPredicted RBP9.54□□□□□ -0.88
SNX20-201ENST00000300590 HERPUD1Q15011 391 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 ARSJQ5FYB0 599 aaPredicted RBP9.54□□□□□ -0.88
SNX20-201ENST00000300590 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 C18orf12Q96KH6 178 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 CDCA3Q99618 268 aaPredicted RBP9.54□□□□□ -0.88
SNX20-201ENST00000300590 TBX21Q9UL17 535 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 DDAH2O95865 285 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 AADACP22760 399 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 PIGYQ3MUY2 71 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 SLC16A14Q7RTX9 510 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 C16orf82Q7Z2V1 217 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 IL22RA1Q8N6P7 574 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 OR2AE1Q8NHA4 323 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 ZNF721Q8TF20 911 aa9.54□□□□□ -0.88
SNX20-201ENST00000300590 TNFP01375 233 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 HNRNPA2B1P22626 353 aaKnown RBP9.53□□□□□ -0.88
SNX20-201ENST00000300590 CTHP32929 405 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 GNB2P62879 340 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 FOXF1Q12946 379 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 FBXO46Q6PJ61 603 aaPredicted RBP9.53□□□□□ -0.88
SNX20-201ENST00000300590 BEND2Q8NDZ0 799 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 LYZL4Q96KX0 146 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 SMIM7Q9BQ49 75 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 RPRMQ9NS64 109 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 AURKAIP1Q9NWT8 199 aaPredicted RBP9.53□□□□□ -0.88
SNX20-201ENST00000300590 WNT16Q9UBV4 365 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 LOC102723971A0A1B0GUV8 181 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 H3BMH7 237 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 SIAH2O43255 324 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 FGF5P12034 268 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 GZMHP20718 246 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 TSPAN7P41732 249 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 ECI1P42126 302 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 CLDN17P56750 224 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 MYBPHQ13203 477 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 THEM4Q5T1C6 240 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 MYPOPQ86VE0 399 aaPredicted RBP9.53□□□□□ -0.88
SNX20-201ENST00000300590 PRR18Q8N4B5 295 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 NEK7Q8TDX7 302 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 RBMXL1Q96E39 390 aaKnown RBP9.53□□□□□ -0.88
SNX20-201ENST00000300590 ACTR3CQ9C0K3 210 aaPredicted RBP9.53□□□□□ -0.88
SNX20-201ENST00000300590 ASCL3Q9NQ33 180 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 COPS7AQ9UBW8 275 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 C3orf85A0A1B0GTC6 90 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 GALR2O43603 387 aaPredicted RBP9.53□□□□□ -0.88
SNX20-201ENST00000300590 TSPAN2O60636 221 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 IGHMP01871 453 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 HBE1P02100 147 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 OPN1MWP04001 364 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 OPN1MW2P0DN77 364 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 OPN1MW3P0DN78 364 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 S100A7P31151 101 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 OR3A1P47881 315 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 OR4D5Q8NGN0 318 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 TMEM234Q8WY98 164 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 IGFLR1Q9H665 355 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 SDF2L1Q9HCN8 221 aa9.53□□□□□ -0.88
SNX20-201ENST00000300590 PITX3O75364 302 aa9.52□□□□□ -0.89
SNX20-201ENST00000300590 CST2P09228 141 aa9.52□□□□□ -0.89
SNX20-201ENST00000300590 NTSR1P30989 418 aa9.52□□□□□ -0.89
SNX20-201ENST00000300590 GUCA1AP43080 201 aaPredicted RBP9.52□□□□□ -0.89
SNX20-201ENST00000300590 CRIP3Q6Q6R5 217 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms