RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 CA10Q9NS85 328 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 FOXJ3Q9UPW0 622 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 RCL1Q9Y2P8 373 aaKnown RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 UFC1Q9Y3C8 167 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 ANKRD31Q8N7Z5 1873 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 KRBOX1C9JBD0 128 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 LALBAP00709 142 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 TCRBP04435 133 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 HTN3P15516 51 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 TNFSF10P50591 281 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 ROM1Q03395 351 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 EBLN2Q6P2I7 272 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 ALKAL2Q6UX46 152 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 CDH26Q8IXH8 852 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 OR4X2Q8NGF9 303 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 SSC4DQ8WTU2 575 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 RNASE6Q93091 150 aaKnown RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 R3HDM4Q96D70 268 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 CSAG2Q9Y5P2 127 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 V9GYS6 101 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 SCN3AQ9NY46 2000 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 TCAPO15273 167 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 ZNF354AO60765 605 aaPredicted RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 CST7O76096 145 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 MAGEB1P43366 347 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 RPS27AP62979 156 aaKnown RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 UBA52P62987 128 aaKnown RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 TEX30Q5JUR7 227 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 LAMTOR1Q6IAA8 161 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 MRM1Q6IN84 353 aaKnown RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 ITPKCQ96DU7 683 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 FCRL1Q96LA6 429 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 PFDN5Q99471 154 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 TMEM165Q9HC07 324 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 GPR27Q9NS67 375 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 GEMIN2O14893 280 aaKnown RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 TBX19O60806 448 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 FCER1GP30273 86 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 PNKDQ8N490 385 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 DYNC2LI1Q8TCX1 351 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 NUDT16L1Q9BRJ7 211 aaKnown RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 H2AFB1P0C5Y9 115 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 RRASP10301 218 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 CBR1P16152 277 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 PSG4Q00888 419 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 SLC25A53Q5H9E4 307 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 C1orf162Q8NEQ5 155 aaPredicted RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 OR4B1Q8NGF8 309 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 TGIF2Q9GZN2 237 aa6.22□□□□□ -1.41
RAG1-201ENST00000299440 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.22□□□□□ -1.41
RAG1-201ENST00000299440 TMEM8BA6NDV4 472 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 LEUTXA8MZ59 168 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 K7N7A8 449 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 HTR1DP28221 377 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 RPS19P39019 145 aaKnown RBP6.21□□□□□ -1.41
RAG1-201ENST00000299440 RPEL1Q2QD12 228 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 ETV3LQ6ZN32 361 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 RFPL4BQ6ZWI9 263 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 CCDC28AQ8IWP9 274 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 SKA3Q8IX90 412 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 STXBP6Q8NFX7 210 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 OR4C13Q8NGP0 309 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 RPUSD4Q96CM3 377 aaKnown RBP6.21□□□□□ -1.41
RAG1-201ENST00000299440 STARD4Q96DR4 205 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 RAB18Q9NP72 206 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 CLCF1Q9UBD9 225 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 METTL1Q9UBP6 276 aaKnown RBP6.21□□□□□ -1.41
RAG1-201ENST00000299440 MSRB2Q9Y3D2 182 aa6.21□□□□□ -1.41
RAG1-201ENST00000299440 TRIP11Q15643 1979 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 CHST1O43916 411 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 RFPL3SP0C7P2 107 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 HLA-GP17693 338 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 FAM3AP98173 230 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 HAGHQ16775 308 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 CMPK2Q5EBM0 449 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 ZNF275Q9NSD4 429 aaPredicted RBP6.21□□□□□ -1.42
RAG1-201ENST00000299440 PIPOXQ9P0Z9 390 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 LSM2Q9Y333 95 aaKnown RBP6.21□□□□□ -1.42
RAG1-201ENST00000299440 PPP1CCP36873 323 aaKnown RBP6.21□□□□□ -1.42
RAG1-201ENST00000299440 CEBPDP49716 269 aaPredicted RBP6.21□□□□□ -1.42
RAG1-201ENST00000299440 PNLIPRP3Q17RR3 467 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 MAMSTRQ6ZN01 415 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 RPS4Y2Q8TD47 263 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 FAM222BQ8WU58 562 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 IL22RA2Q969J5 263 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 ADAM10O14672 748 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 FFAR1O14842 300 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 ACSM4P0C7M7 580 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 ZNF137PP52743 207 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 FABP5Q01469 135 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 LSAMPQ13449 338 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 PCSK4Q6UW60 755 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 C17orf47Q8NEP4 570 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 GON7Q9BXV9 100 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 TLNRD1Q9H1K6 362 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 CACNG5Q9UF02 275 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 RIF1Q5UIP0 2472 aaKnown RBP6.21□□□□□ -1.42
RAG1-201ENST00000299440 SNCGO76070 127 aa6.21□□□□□ -1.42
RAG1-201ENST00000299440 RPS10P46783 165 aaKnown RBP6.21□□□□□ -1.42
RAG1-201ENST00000299440 H3F3AP84243 136 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms