RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 VSTM2BA6NLU5 285 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 LDLRAD4O15165 306 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 TCF21O43680 179 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 H1FNTQ75WM6 255 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-201ENST00000297423 OR2AE1Q8NHA4 323 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 CLDN23Q96B33 292 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 SRPK3Q9UPE1 567 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 TRAV34A0A0B4J273 112 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF816-ZNF321PA0A0X1KG74 233 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 TMEM14DPA8MWL7 114 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 PIAS2O75928 621 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF43P17038 809 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 FASLGP48023 281 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 MFAP5Q13361 173 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 NAT6Q93015 286 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 RBMXL1Q96E39 390 aaKnown RBP12.98□□□□□ -0.33
SPIDR-201ENST00000297423 SGCZQ96LD1 299 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 RSG1Q9BU20 258 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 NAA60Q9H7X0 242 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 CACNA1HO95180 2353 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 ADAM20O43506 726 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
SPIDR-201ENST00000297423 CHRNA7P36544 502 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF41P51814 821 aaPredicted RBP12.98□□□□□ -0.33
SPIDR-201ENST00000297423 PAX5Q02548 391 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 TNFRSF9Q07011 255 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 TOMM20LQ6UXN7 152 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 IL22RA1Q8N6P7 574 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 TMEM234Q8WY98 164 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 SLC2A9Q9NRM0 540 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 NECAP2Q9NVZ3 263 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 DKKL1Q9UK85 242 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 PITPNC1Q9UKF7 332 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 LILRA5A6NI73 299 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 DUX1O43812 170 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 OR5I1Q13606 314 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 RTP5Q14D33 572 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 C5orf24Q7Z6I8 188 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 OR10A7Q8NGE5 316 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 UBALD1Q8TB05 177 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 FOXD3Q9UJU5 478 aaPredicted RBP12.98□□□□□ -0.33
SPIDR-201ENST00000297423 PAM16Q9Y3D7 125 aa12.98□□□□□ -0.33
SPIDR-201ENST00000297423 COX5BP10606 129 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 RPS2P15880 293 aaKnown RBP12.97□□□□□ -0.33
SPIDR-201ENST00000297423 P2RY6Q15077 328 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 RTL6Q6ICC9 239 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 SNIP1Q8TAD8 396 aaKnown RBP12.97□□□□□ -0.33
SPIDR-201ENST00000297423 IL1F10Q8WWZ1 152 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 TMEM18Q96B42 140 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 CALHM2Q9HA72 323 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 OSGIN2Q9Y236 505 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 MT-ATP6P00846 226 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 LCATP04180 440 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 CST2P09228 141 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 ARF1P84077 181 aaKnown RBP12.97□□□□□ -0.33
SPIDR-201ENST00000297423 COL10A1Q03692 680 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 OR8G2PQ6IF36 304 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 PLXDC1Q8IUK5 500 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 FLVCR1-AS1Q8TAF5 88 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 SDSLQ96GA7 329 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 PCGF1Q9BSM1 259 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 UCK1Q9HA47 277 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF581Q9P0T4 197 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 PLCE1Q9P212 2302 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 IL33O95760 270 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 OR4A8P0C604 315 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 WNT5AP41221 380 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 GLIPR1P48060 266 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 GFERP55789 205 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 FAM69BQ5VUD6 431 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 MRPL37Q9BZE1 423 aaKnown RBP12.97□□□□□ -0.33
SPIDR-201ENST00000297423 ANXA10Q9UJ72 324 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 GPR179Q6PRD1 2367 aa12.97□□□□□ -0.33
SPIDR-201ENST00000297423 PMP22Q01453 160 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 GRINAQ7Z429 371 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 MVB12AQ96EY5 273 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 FAM103A1Q9BTL3 118 aaKnown RBP12.96□□□□□ -0.33
SPIDR-201ENST00000297423 DUSP15Q9H1R2 295 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-201ENST00000297423 GPR27Q9NS67 375 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 ABCA1O95477 2261 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 FAM157AC9JC47 383 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 CARD18P57730 90 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 OR1D5P58170 312 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 NUTF2P61970 127 aaKnown RBP12.96□□□□□ -0.33
SPIDR-201ENST00000297423 FOXO1Q12778 655 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 FDX2Q6P4F2 183 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 BTNL3Q6UXE8 466 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 ARHGEF39Q8N4T4 335 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 MALSU1Q96EH3 234 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 BORCS8Q96FH0 119 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF319Q9P2F9 582 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 PCNX3Q9H6A9 2034 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 C9J4A7 227 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 PNLIPP16233 465 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 HIKESHIQ53FT3 197 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 TMEM41BQ5BJD5 291 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 CCDC71LQ8N9Z2 235 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 OR13D1Q8NGV5 346 aa12.96□□□□□ -0.33
SPIDR-201ENST00000297423 PTX4Q96A99 478 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms