RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 F12P00748 615 aaPredicted RBP12.96□□□□□ -0.34
CCDC116-201ENST00000292779 GAPDHP04406 335 aaKnown RBP12.96□□□□□ -0.34
CCDC116-201ENST00000292779 UCP3P55916 312 aa12.96□□□□□ -0.34
CCDC116-201ENST00000292779 HERV-K104P61576 105 aa12.96□□□□□ -0.34
CCDC116-201ENST00000292779 TMEM88Q6PEY1 159 aa12.96□□□□□ -0.34
CCDC116-201ENST00000292779 SYT3Q9BQG1 590 aa12.96□□□□□ -0.34
CCDC116-201ENST00000292779 RSRP1Q9BUV0 290 aa12.96□□□□□ -0.34
CCDC116-201ENST00000292779 PLEKHA2Q9HB19 425 aa12.96□□□□□ -0.34
CCDC116-201ENST00000292779 PURGQ9UJV8 347 aaKnown RBP12.96□□□□□ -0.34
CCDC116-201ENST00000292779 DOCK7Q96N67 2140 aa12.96□□□□□ -0.34
CCDC116-201ENST00000292779 E5RGE8 158 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 RPL36A-HNRNPH2H7BZ11 118 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 PHF1O43189 567 aaPredicted RBP12.95□□□□□ -0.34
CCDC116-201ENST00000292779 MUC1P15941 1255 aaPredicted RBP12.95□□□□□ -0.34
CCDC116-201ENST00000292779 PMELP40967 661 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 HAAOP46952 286 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 CAV2P51636 162 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 GPM6AP51674 278 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 Q8NFD4 153 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 OR52M1Q8NGK5 317 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 HPSE2Q8WWQ2 592 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 EXTL1Q92935 676 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 BSCL2Q96G97 398 aaPredicted RBP12.95□□□□□ -0.34
CCDC116-201ENST00000292779 HS3ST6Q96QI5 342 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 NSG2Q9Y328 171 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 TNRC6AQ8NDV7 1962 aaKnown RBP12.95□□□□□ -0.34
CCDC116-201ENST00000292779 PPYP01298 95 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 NOVA1P51513 510 aaKnown RBP12.95□□□□□ -0.34
CCDC116-201ENST00000292779 MRPL21Q7Z2W9 205 aaKnown RBP12.95□□□□□ -0.34
CCDC116-201ENST00000292779 C5orf24Q7Z6I8 188 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 LGI3Q8N145 548 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 ABI3Q9P2A4 366 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 IL17BQ9UHF5 180 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 ARHGAP21Q5T5U3 1957 aa12.95□□□□□ -0.34
CCDC116-201ENST00000292779 TNFSF15O95150 251 aa12.94□□□□□ -0.34
CCDC116-201ENST00000292779 ID4P47928 161 aa12.94□□□□□ -0.34
CCDC116-201ENST00000292779 BTNL8Q6UX41 500 aa12.94□□□□□ -0.34
CCDC116-201ENST00000292779 TMEM251Q8N6I4 163 aa12.94□□□□□ -0.34
CCDC116-201ENST00000292779 CCDC71LQ8N9Z2 235 aa12.94□□□□□ -0.34
CCDC116-201ENST00000292779 TP53RKQ96S44 253 aa12.94□□□□□ -0.34
CCDC116-201ENST00000292779 SEC11CQ9BY50 192 aa12.94□□□□□ -0.34
CCDC116-201ENST00000292779 DMXL2Q8TDJ6 3036 aa12.94□□□□□ -0.34
CCDC116-201ENST00000292779 PROB1E7EW31 1015 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 AGPAT2O15120 278 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 DUSP1P28562 367 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 ZDHHC23Q8IYP9 409 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 UBAC2Q8NBM4 344 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 NRIP2Q9BQI9 281 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 IL36RNQ9UBH0 155 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 CEP295Q9C0D2 2601 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A10PA6NDY2 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A18PA6NE21 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A16PA6NEW6 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A20PA6NIJ5 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A8PA6NJQ4 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A7PA6NKC0 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A22PA8MWA6 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A12PA8MX19 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A5PA8MXJ8 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A23PA8MXZ1 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 NGFP01138 241 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A15PP0C7V4 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A13PP0C7W8 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A14PP0C7W9 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FAM90A24PP0C7X0 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 PLGLB1Q02325 96 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 C3AR1Q16581 482 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 CEACAM21Q3KPI0 293 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FBXW12Q6X9E4 464 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 MEX3BQ6ZN04 569 aaKnown RBP12.93□□□□□ -0.34
CCDC116-201ENST00000292779 Q6ZRG5 221 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 CBLN2Q8IUK8 224 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 SLC35G3Q8N808 338 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 APOBEC3DQ96AK3 386 aaPredicted RBP12.93□□□□□ -0.34
CCDC116-201ENST00000292779 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 POM121Q96HA1 1249 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 WFDC1Q9HC57 220 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 PARP11Q9NR21 331 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 RCC2Q9P258 522 aaKnown RBP12.93□□□□□ -0.34
CCDC116-201ENST00000292779 FBXO9Q9UK97 447 aaPredicted RBP12.93□□□□□ -0.34
CCDC116-201ENST00000292779 ZDHHC8Q9ULC8 765 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 PRELID1Q9Y255 219 aa12.93□□□□□ -0.34
CCDC116-201ENST00000292779 ZNF732B4DXR9 585 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 RNASEK-C17orf49H0YIS7 233 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 MPPED1O15442 326 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 COX5BP10606 129 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 NPBWR1P48145 328 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 FGF12P61328 243 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 RAB1AP62820 205 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 HAGHLQ6PII5 290 aaPredicted RBP12.92□□□□□ -0.34
CCDC116-201ENST00000292779 PARP12Q9H0J9 701 aaKnown RBP12.92□□□□□ -0.34
CCDC116-201ENST00000292779 MTCH1Q9NZJ7 389 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 C3orf85A0A1B0GTC6 90 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 HSPB6O14558 160 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 GPR137BO60478 399 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 SNAPINO95295 136 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 GNRHRP30968 328 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 NHLH1Q02575 133 aa12.92□□□□□ -0.34
CCDC116-201ENST00000292779 SAXO1Q8IYX7 474 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms