RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 IGKV3D-11A0A0A0MRZ8 115 aa11.68□□□□□ -0.54
SCAF4-201ENST00000286835 A0A0U1RQK1 487 aa11.68□□□□□ -0.54
SCAF4-201ENST00000286835 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
SCAF4-201ENST00000286835 TRAF3IP2O43734 574 aaPredicted RBP11.68□□□□□ -0.54
SCAF4-201ENST00000286835 SRSF10O75494 262 aaKnown RBP11.68□□□□□ -0.54
SCAF4-201ENST00000286835 SSR4P51571 173 aa11.68□□□□□ -0.54
SCAF4-201ENST00000286835 RPS16P62249 146 aaKnown RBP11.68□□□□□ -0.54
SCAF4-201ENST00000286835 PLPPR5Q32ZL2 321 aa11.68□□□□□ -0.54
SCAF4-201ENST00000286835 TVP23CQ96ET8 276 aa11.68□□□□□ -0.54
SCAF4-201ENST00000286835 TGIF2-C20orf24A0A0A6YYL0 155 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 SYNGR4O95473 234 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 CTAG1AP78358 180 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 CXorf66Q5JRM2 361 aaPredicted RBP11.67□□□□□ -0.54
SCAF4-201ENST00000286835 OR8G2PQ6IF36 304 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 SNX22Q96L94 193 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 SSX3Q99909 188 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 WFDC1Q9HC57 220 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 IGHMP01871 453 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 HEXAP06865 529 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 RBMXL1Q96E39 390 aaKnown RBP11.67□□□□□ -0.54
SCAF4-201ENST00000286835 CABLES2Q9BTV7 478 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 CHST5Q9GZS9 411 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 UFSP2Q9NUQ7 469 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 METTL1Q9UBP6 276 aaKnown RBP11.67□□□□□ -0.54
SCAF4-201ENST00000286835 ZNF407Q9C0G0 2248 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 KIAA2026Q5HYC2 2103 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 A0A096LPE4 126 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 A0A1W2PPZ6 126 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 CD300LBA8K4G0 201 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 EFNA2O43921 213 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 CELA2AP08217 269 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 ANOS1P23352 680 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 CCL20P78556 96 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 KMT5CQ86Y97 462 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 RPUSD4Q96CM3 377 aaKnown RBP11.67□□□□□ -0.54
SCAF4-201ENST00000286835 SPACA9Q96E40 222 aaPredicted RBP11.67□□□□□ -0.54
SCAF4-201ENST00000286835 OR5B12Q96R08 314 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 TIMM10BQ9Y5J6 103 aa11.67□□□□□ -0.54
SCAF4-201ENST00000286835 CCL2P13500 99 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 EDN3P14138 238 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 SUMO3P55854 103 aaPredicted RBP11.66□□□□□ -0.54
SCAF4-201ENST00000286835 ZXDAP98168 799 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 WDR5BQ86VZ2 330 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 OIT3Q8WWZ8 545 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 OCIAD1Q9NX40 245 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 B3GAT1Q9P2W7 334 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 GABRA4P48169 554 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 IZUMO4Q1ZYL8 232 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 C5orf24Q7Z6I8 188 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 C1orf87Q8N0U7 546 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 PLEKHF2Q9H8W4 249 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 E9PLN8 166 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 MASP2O00187 686 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 ZNF32P17041 273 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 RND3P61587 244 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 IL13RA2Q14627 380 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 MRPL21Q7Z2W9 205 aaKnown RBP11.66□□□□□ -0.54
SCAF4-201ENST00000286835 HSF4Q9ULV5 492 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 POLEQ07864 2286 aa11.66□□□□□ -0.54
SCAF4-201ENST00000286835 CHST1O43916 411 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 TNFSF15O95150 251 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 OR8U8P0C7N1 319 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 HAAOP46952 286 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 RPS23P62266 143 aaKnown RBP11.65□□□□□ -0.54
SCAF4-201ENST00000286835 PMS2CLQ68D20 193 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 C6orf15Q6UXA7 325 aaPredicted RBP11.65□□□□□ -0.54
SCAF4-201ENST00000286835 TBC1D26Q86UD7 250 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 FRZBQ92765 325 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 RASL10BQ96S79 203 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 TMED3Q9Y3Q3 217 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 KLF2Q9Y5W3 355 aaPredicted RBP11.65□□□□□ -0.54
SCAF4-201ENST00000286835 PCDH15Q96QU1 1955 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 NCOA6Q14686 2063 aaPredicted RBP11.65□□□□□ -0.54
SCAF4-201ENST00000286835 CXorf65A6NEN9 183 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 UBE2CO00762 179 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 TERTO14746 1132 aaKnown RBP11.65□□□□□ -0.54
SCAF4-201ENST00000286835 IFNA10P01566 189 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 MMP9P14780 707 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 MPZP25189 248 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 SPANXN5Q5MJ07 72 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 ZNF787Q6DD87 383 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 ZNF880Q6PDB4 577 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 SLC25A47Q6Q0C1 308 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 EXTL1Q92935 676 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 ZNF837Q96EG3 531 aaPredicted RBP11.65□□□□□ -0.54
SCAF4-201ENST00000286835 FAM210BQ96KR6 192 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 HDGFL3Q9Y3E1 203 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 PPYP01298 95 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 HBE1P02100 147 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 THOC3Q96J01 351 aaKnown RBP11.65□□□□□ -0.54
SCAF4-201ENST00000286835 SLC7A10Q9NS82 523 aa11.65□□□□□ -0.54
SCAF4-201ENST00000286835 CXCL13O43927 109 aa11.64□□□□□ -0.55
SCAF4-201ENST00000286835 SSX2Q16385 188 aa11.64□□□□□ -0.55
SCAF4-201ENST00000286835 LHFPL1Q86WI0 220 aa11.64□□□□□ -0.55
SCAF4-201ENST00000286835 TP53RKQ96S44 253 aa11.64□□□□□ -0.55
SCAF4-201ENST00000286835 ZNF318Q5VUA4 2279 aa11.64□□□□□ -0.55
SCAF4-201ENST00000286835 TRAV39A0A0B4J263 110 aa11.64□□□□□ -0.55
SCAF4-201ENST00000286835 MPPED1O15442 326 aa11.64□□□□□ -0.55
SCAF4-201ENST00000286835 CYTIPO60759 359 aa11.64□□□□□ -0.55
SCAF4-201ENST00000286835 CFPP27918 469 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms