RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 MMP28Q9H239 520 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 CLEC4MQ9H2X3 399 aaPredicted RBP9.55□□□□□ -0.88
XRCC4-201ENST00000282268 SPACA1Q9HBV2 294 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 TMEM106BQ9NUM4 274 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 PLEKHA6Q9Y2H5 1048 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 ANKHD1Q8IWZ3 2542 aaKnown RBP9.55□□□□□ -0.88
XRCC4-201ENST00000282268 IGKV1D-17A0A075B6S4 117 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 FAM240BA0A1B0GVZ2 78 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 ZNF736B4DX44 427 aaPredicted RBP9.55□□□□□ -0.88
XRCC4-201ENST00000282268 RAB3DO95716 219 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 FCGR3AP08637 254 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 AKAIN1P0CW23 69 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 GIFP27352 417 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 CBX5P45973 191 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 TAS2R19P59542 299 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 CARTPTQ16568 116 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 MICBQ29980 383 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 STEAP1BQ6NZ63 245 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 ZNF782Q6ZMW2 699 aaPredicted RBP9.55□□□□□ -0.88
XRCC4-201ENST00000282268 TMEM229BQ8NBD8 167 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 OR4C16Q8NGL9 310 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 OR4K15Q8NH41 348 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 OR56B4Q8NH76 319 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 CCL13Q99616 98 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 TINAGL1Q9GZM7 467 aaPredicted RBP9.55□□□□□ -0.88
XRCC4-201ENST00000282268 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.55□□□□□ -0.88
XRCC4-201ENST00000282268 TAS2R8Q9NYW2 309 aa9.55□□□□□ -0.88
XRCC4-201ENST00000282268 RCC2Q9P258 522 aaKnown RBP9.55□□□□□ -0.88
XRCC4-201ENST00000282268 ICE1Q9Y2F5 2266 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 FLNCQ14315 2725 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 MEX3AA1L020 520 aaKnown RBP9.54□□□□□ -0.88
XRCC4-201ENST00000282268 TMEM178BH3BS89 294 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 PSPNO60542 156 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 PTTG1O95997 202 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 HRH1P35367 487 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 CFHR2P36980 270 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 RBM39Q14498 530 aaKnown RBP9.54□□□□□ -0.88
XRCC4-201ENST00000282268 EDDM3AQ14507 147 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 HFEQ30201 348 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 CCBE1Q6UXH8 406 aaPredicted RBP9.54□□□□□ -0.88
XRCC4-201ENST00000282268 HOGA1Q86XE5 327 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 FAM90A1Q86YD7 464 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 BEST4Q8NFU0 473 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 PLPPR1Q8TBJ4 325 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 CHPT1Q8WUD6 406 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 SNAPC3Q92966 411 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 OCSTAMPQ9BR26 566 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 C12orf4Q9NQ89 552 aa9.54□□□□□ -0.88
XRCC4-201ENST00000282268 CHD3Q12873 2000 aaKnown RBP9.54□□□□□ -0.88
XRCC4-201ENST00000282268 UBR5O95071 2799 aaPredicted RBP9.53□□□□□ -0.88
XRCC4-201ENST00000282268 CHD6Q8TD26 2715 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 PPIAL4EA0A075B759 164 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 IGKV1D-8A0A087WSZ0 117 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 A0A1B0GW55 424 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 TMEM82A0PJX8 343 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 OOEPA6NGQ2 149 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 PPIAL4DF5H284 164 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 H3BUI4 141 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 AMY2AP04746 511 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DUX4L2P0CJ85 424 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DUX4L3P0CJ86 424 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DUX4L4P0CJ87 422 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DUX4L5P0CJ88 424 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DUX4L6P0CJ89 424 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DUX4L7P0CJ90 424 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 PPIAL4FP0DN26 164 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 SELLP14151 372 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 RAB25P57735 213 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 SSBP1Q04837 148 aaKnown RBP9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DYRK1AQ13627 763 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 OXA1LQ15070 435 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 GRK1Q15835 563 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 CHRFAM7AQ494W8 412 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 SCGB2B2Q4G0G5 96 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DUX4L9Q6RFH8 374 aaPredicted RBP9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DTX2Q86UW9 622 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 C1orf87Q8N0U7 546 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 TPRX1Q8N7U7 411 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 ZNRF1Q8ND25 227 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 POM121Q96HA1 1249 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 IFT22Q9H7X7 185 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 DUX4Q9UBX2 424 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 PPIAL4AQ9Y536 164 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 ROS1P08922 2347 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 PLCE1Q9P212 2302 aa9.53□□□□□ -0.88
XRCC4-201ENST00000282268 SPTBN1Q01082 2364 aaKnown RBP9.53□□□□□ -0.88
XRCC4-201ENST00000282268 SDCBPO00560 298 aaPredicted RBP9.52□□□□□ -0.89
XRCC4-201ENST00000282268 NDUFS7O75251 213 aa9.52□□□□□ -0.89
XRCC4-201ENST00000282268 CA11O75493 328 aa9.52□□□□□ -0.89
XRCC4-201ENST00000282268 BTCP35070 178 aa9.52□□□□□ -0.89
XRCC4-201ENST00000282268 FAUP35544 74 aaKnown RBP9.52□□□□□ -0.89
XRCC4-201ENST00000282268 OR3A1P47881 315 aa9.52□□□□□ -0.89
XRCC4-201ENST00000282268 OR3A3P47888 321 aa9.52□□□□□ -0.89
XRCC4-201ENST00000282268 ARPC4P59998 168 aa9.52□□□□□ -0.89
XRCC4-201ENST00000282268 TLE4Q04727 773 aa9.52□□□□□ -0.89
XRCC4-201ENST00000282268 AESQ08117 197 aa9.52□□□□□ -0.89
XRCC4-201ENST00000282268 RNASE10Q5GAN6 216 aaKnown RBP9.52□□□□□ -0.89
XRCC4-201ENST00000282268 AVPI1Q5T686 147 aa9.52□□□□□ -0.89
XRCC4-201ENST00000282268 RSBN1Q5VWQ0 802 aaPredicted RBP9.52□□□□□ -0.89
XRCC4-201ENST00000282268 C20orf204Q6ZNR8 217 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms