RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 OR2A7Q96R45 310 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 WDR13Q9H1Z4 485 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 RIMS4Q9H426 269 aaPredicted RBP18.67■□□□□ 0.58
CCDC7-201ENST00000277657 CHMP1AQ9HD42 196 aaPredicted RBP18.67■□□□□ 0.58
CCDC7-201ENST00000277657 Q9N2K0 584 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 PIPOXQ9P0Z9 390 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 MED19A0JLT2 244 aaPredicted RBP18.67■□□□□ 0.58
CCDC7-201ENST00000277657 DPRXA6NFQ7 191 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 ZSCAN5BA6NJL1 495 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 HSPB6O14558 160 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 HS3ST1O14792 307 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 HLA-AP01891 365 aaKnown RBP18.67■□□□□ 0.58
CCDC7-201ENST00000277657 ECI1P42126 302 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 DHODHQ02127 395 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 LY6DQ14210 128 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 C2orf68Q2NKX9 166 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 VHLLQ6RSH7 139 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 OR2Z1Q8NG97 314 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 NEK7Q8TDX7 302 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 RDH5Q92781 318 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 SYT3Q9BQG1 590 aa18.67■□□□□ 0.58
CCDC7-201ENST00000277657 ZNF2Q9BSG1 426 aaPredicted RBP18.67■□□□□ 0.58
CCDC7-201ENST00000277657 RTBDNQ9BSG5 229 aaPredicted RBP18.67■□□□□ 0.58
CCDC7-201ENST00000277657 TRBV6-6A0A0A6YYG2 114 aa18.66■□□□□ 0.58
CCDC7-201ENST00000277657 C9orf170A2RU37 121 aa18.66■□□□□ 0.58
CCDC7-201ENST00000277657 GIPP09681 153 aaPredicted RBP18.66■□□□□ 0.58
CCDC7-201ENST00000277657 ASCL1P50553 236 aa18.66■□□□□ 0.58
CCDC7-201ENST00000277657 HYLS1Q96M11 299 aa18.66■□□□□ 0.58
CCDC7-201ENST00000277657 MRPL37Q9BZE1 423 aaKnown RBP18.66■□□□□ 0.58
CCDC7-201ENST00000277657 LIME1Q9H400 295 aa18.66■□□□□ 0.58
CCDC7-201ENST00000277657 A6NLC8 198 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 CCL21O00585 134 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 OR2H2O95918 312 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 GSTT2P0CG29 244 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 ZNF44P15621 663 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 TMEM128Q5BJH2 165 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 TMEM230Q96A57 120 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 RANBP3Q9H6Z4 567 aaPredicted RBP18.65■□□□□ 0.58
CCDC7-201ENST00000277657 NBEAQ8NFP9 2946 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 SLC33A1O00400 549 aaPredicted RBP18.65■□□□□ 0.58
CCDC7-201ENST00000277657 AKR1C4P17516 323 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 IL13RA1P78552 427 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 FBXL19-AS1Q494R0 122 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 SHEQ5VZ18 495 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 FIP1L1Q6UN15 594 aaKnown RBP18.65■□□□□ 0.58
CCDC7-201ENST00000277657 UXS1Q8NBZ7 420 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 MRPL30Q8TCC3 161 aaKnown RBP18.65■□□□□ 0.58
CCDC7-201ENST00000277657 MITD1Q8WV92 249 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 WFIKKN1Q96NZ8 548 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 TREM2Q9NZC2 230 aa18.65■□□□□ 0.58
CCDC7-201ENST00000277657 PLSCR5A0PG75 271 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 G3V3Q6 166 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 ABCD4O14678 606 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 SH2D1BO14796 132 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 CHRNB4P30926 498 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 H2BFSP57053 126 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 SELENOVP59797 346 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 BSPH1Q075Z2 132 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 BAMBIQ13145 260 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 ZBTB8BQ8NAP8 495 aaPredicted RBP18.64■□□□□ 0.57
CCDC7-201ENST00000277657 MRPL24Q96A35 216 aaKnown RBP18.64■□□□□ 0.57
CCDC7-201ENST00000277657 DHRS9Q9BPW9 319 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 UFSP2Q9NUQ7 469 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 PLCE1Q9P212 2302 aa18.64■□□□□ 0.57
CCDC7-201ENST00000277657 POM121CA8CG34 1229 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 WNT9BO14905 357 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 DUS4LO95620 317 aaKnown RBP18.63■□□□□ 0.57
CCDC7-201ENST00000277657 MDH2P40926 338 aaKnown RBP18.63■□□□□ 0.57
CCDC7-201ENST00000277657 GMFBP60983 142 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 RAP2BP61225 183 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 ZNF880Q6PDB4 577 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 ACP7Q6ZNF0 438 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 ELMOD3Q96FG2 381 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 TAAR3PQ9P1P4 343 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 GOSR2O14653 212 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 SLC22A5O76082 557 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 CD34P28906 385 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 CFHR2P36980 270 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 PAN3Q58A45 887 aaKnown RBP18.63■□□□□ 0.57
CCDC7-201ENST00000277657 PCSK4Q6UW60 755 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 C20orf204Q6ZNR8 217 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 GAPTQ8N292 157 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 OR2T35Q8NGX2 323 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 ZFAND1Q8TCF1 268 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 CHIAQ9BZP6 476 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 TMEM165Q9HC07 324 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 C1orf123Q9NWV4 160 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 ATP23Q9Y6H3 246 aa18.63■□□□□ 0.57
CCDC7-201ENST00000277657 ADGRG4Q8IZF6 3080 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 ERVH48-1M5A8F1 160 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 SIRPB1O00241 398 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 HAND1O96004 215 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 PI3P19957 117 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 GLRA1P23415 457 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 LMO1P25800 156 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 OR11H4Q8NGC9 324 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 OR10Z1Q8NGY1 313 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 TMPRSS13Q9BYE2 586 aa18.62■□□□□ 0.57
CCDC7-201ENST00000277657 CHD3Q12873 2000 aaKnown RBP18.62■□□□□ 0.57
CCDC7-201ENST00000277657 KIR2DS1A0A191URI9 304 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms