RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TM2D1Q9BX74 207 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 IGKV1-12A0A0C4DH73 117 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 IGKV1D-12P01611 117 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 DRD1P21728 446 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 MSR1P21757 451 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 Q6ZPA2 131 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 GJC3Q8NFK1 279 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 MISP3Q96FF7 219 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 BORCS8Q96FH0 119 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 CALHM2Q9HA72 323 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 MMP17Q9ULZ9 603 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 ASPMQ8IZT6 3477 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 HMGB3O15347 200 aaKnown RBP11.18□□□□□ -0.62
COL8A1-202ENST00000273342 MRPS21P82921 87 aaKnown RBP11.18□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF266Q14584 549 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 OR6X1Q8NH79 312 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 CPNE4Q96A23 557 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-202ENST00000273342 OXGR1Q96P68 337 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 HSPA12AO43301 675 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 CHST1O43916 411 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 TIAF1O95411 115 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 CD55P08174 381 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF133P52736 654 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-202ENST00000273342 TMEM267Q0VDI3 215 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-202ENST00000273342 ENDOGQ14249 297 aaKnown RBP11.18□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF385CQ66K41 422 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-202ENST00000273342 SLC16A14Q7RTX9 510 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 KDF1Q8NAX2 398 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-202ENST00000273342 NBEAQ8NFP9 2946 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 GTF3AQ92664 365 aaKnown RBP11.18□□□□□ -0.62
COL8A1-202ENST00000273342 RSG1Q9BU20 258 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF665Q9H7R5 613 aa11.18□□□□□ -0.62
COL8A1-202ENST00000273342 A0A1W2PNV4 684 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 C2CD4DB7Z1M9 353 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 RRP8O43159 456 aaKnown RBP11.17□□□□□ -0.62
COL8A1-202ENST00000273342 FOSL1P15407 271 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 CD200P41217 278 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 ECI1P42126 302 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 HIST2H3PS2Q5TEC6 136 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF774Q6NX45 483 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 TBC1D26Q86UD7 250 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 D2HGDHQ8N465 521 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 OR4D5Q8NGN0 318 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 PP6455Q8WZ26 134 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 PIGCQ92535 297 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 WFIKKN1Q96NZ8 548 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 VSIRQ9H7M9 311 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 UNKLQ9H9P5 680 aaKnown RBP11.17□□□□□ -0.62
COL8A1-202ENST00000273342 SLC7A10Q9NS82 523 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 ZDBF2Q9HCK1 2354 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 KNTC1P50748 2209 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 LILRA5A6NI73 299 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 TSTD3H0UI37 97 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 MPPED1O15442 326 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 TLX3O43711 291 aaPredicted RBP11.17□□□□□ -0.62
COL8A1-202ENST00000273342 HLA-DRB3P79483 266 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 MRPS34P82930 218 aaKnown RBP11.17□□□□□ -0.62
COL8A1-202ENST00000273342 ARL6IP1Q15041 203 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 MRGPRX4Q96LA9 322 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 KIAA1456Q9P272 454 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 SMCO3A2RU48 225 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 PPYP01298 95 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 LMO1P25800 156 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 CD38P28907 300 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 IL2RGP31785 369 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 GLIPR1P48060 266 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 NPBWR2P48146 333 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 ANKRD37Q7Z713 158 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 LILRB2Q8N423 598 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 TSTD1Q8NFU3 115 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 AKIRIN1Q9H9L7 192 aaPredicted RBP11.17□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF286AQ9HBT8 521 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 LRFN1Q9P244 771 aa11.17□□□□□ -0.62
COL8A1-202ENST00000273342 IGHV1OR21-1A0A087WYE8 117 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 NPIPB13A6NJU9 1138 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 NPIPB4C9JG80 1138 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 CELA2AP08217 269 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 APLNRP35414 380 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF468Q5VIY5 522 aaPredicted RBP11.16□□□□□ -0.62
COL8A1-202ENST00000273342 LRP11Q86VZ4 500 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 STX12Q86Y82 276 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 PLEKHF2Q9H8W4 249 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 GAB2Q9UQC2 676 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 V9GYS6 101 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 NPIPA2E9PIF3 369 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 NPIPA3F8WFD2 350 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 IFNL4K9M1U5 179 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 SSX2Q16385 188 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 RAET1LQ5VY80 246 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 GAPTQ8N292 157 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 OR5T1Q8NG75 326 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 CLDND2Q8NHS1 167 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 MVB12AQ96EY5 273 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 THOC3Q96J01 351 aaKnown RBP11.16□□□□□ -0.62
COL8A1-202ENST00000273342 HIST1H2BLQ99880 126 aa11.16□□□□□ -0.62
COL8A1-202ENST00000273342 TMED3Q9Y3Q3 217 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms