RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 GRNP28799 593 aaKnown RBP13.81□□□□□ -0.2
TPM1-201ENST00000267996 ARPC4P59998 168 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 TFF3Q07654 80 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 AADACL3Q5VUY0 350 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 ZNF660Q6AZW8 331 aaPredicted RBP13.81□□□□□ -0.2
TPM1-201ENST00000267996 ADAM5Q6NVV9 412 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 FIP1L1Q6UN15 594 aaKnown RBP13.81□□□□□ -0.2
TPM1-201ENST00000267996 TCTE3Q8IZS6 198 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 OR11H7Q8NGC8 314 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 PRR7Q8TB68 274 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 CCDC107Q8WV48 283 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 PLPPR2Q96GM1 343 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 OR2V2Q96R30 315 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 Q9N2K0 584 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 RASL12Q9NYN1 266 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 TREM2Q9NZC2 230 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 ZDHHC8Q9ULC8 765 aa13.81□□□□□ -0.2
TPM1-201ENST00000267996 CHD3Q12873 2000 aaKnown RBP13.81□□□□□ -0.2
TPM1-201ENST00000267996 SLC33A1O00400 549 aaPredicted RBP13.8□□□□□ -0.2
TPM1-201ENST00000267996 HS3ST1O14792 307 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 CREBL2O60519 120 aaPredicted RBP13.8□□□□□ -0.2
TPM1-201ENST00000267996 KNG1P01042 644 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 IGHV1-46P01743 117 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 TSPAN5P62079 268 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 C4orf17Q53FE4 359 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 SPRNQ5BIV9 151 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 ZNF880Q6PDB4 577 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 PEG10Q86TG7 708 aaKnown RBP13.8□□□□□ -0.2
TPM1-201ENST00000267996 SLC25A42Q86VD7 318 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 GAPTQ8N292 157 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 LINC01560Q8TB33 94 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 RDH5Q92781 318 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 WDR13Q9H1Z4 485 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 SEBOXQ9HB31 216 aaPredicted RBP13.8□□□□□ -0.2
TPM1-201ENST00000267996 RANGRFQ9HD47 186 aaPredicted RBP13.8□□□□□ -0.2
TPM1-201ENST00000267996 NECAP2Q9NVZ3 263 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 ETAA1Q9NY74 926 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 IL19Q9UHD0 177 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 ADGRG4Q8IZF6 3080 aa13.8□□□□□ -0.2
TPM1-201ENST00000267996 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 VSTM5A8MXK1 200 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 SRRM5B3KS81 715 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 HAND1O96004 215 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 GLRA1P23415 457 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 CD83Q01151 205 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 DHRS11Q6UWP2 260 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 MRPL30Q8TCC3 161 aaKnown RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 MARCH1Q8TCQ1 289 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 NEK7Q8TDX7 302 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 LRRC29Q8WV35 223 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 ITLN1Q8WWA0 313 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 CAPSLQ8WWF8 208 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 DACT3Q96B18 629 aaPredicted RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 DECR2Q9NUI1 292 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 GPR132Q9UNW8 380 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 ANKHD1Q8IWZ3 2542 aaKnown RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 ROS1P08922 2347 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 hCG_1807616A0A1W2PRN6 198 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 E7EQL1 145 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 HSPB6O14558 160 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 SSNA1O43805 119 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 LHBP01229 141 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 CD3EP07766 207 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 OR4E1P0C645 316 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 OR5H8P0DN80 308 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 FPR2P25090 351 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 MDH2P40926 338 aaKnown RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 EIF2B2P49770 351 aaKnown RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 GMFBP60983 142 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 SNTB1Q13884 538 aaKnown RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 SMIM21Q3B7S5 101 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 PAN3Q58A45 887 aaKnown RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 FAHD2BQ6P2I3 314 aaPredicted RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 TMED4Q7Z7H5 227 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 FAM90A1Q86YD7 464 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 OR52B4Q8NGK2 314 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 FAHD2AQ96GK7 314 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 SCGB3A2Q96PL1 93 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 FYTTD1Q96QD9 318 aaKnown RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 DIRC2Q96SL1 478 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 TMEM165Q9HC07 324 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 CHMP1AQ9HD42 196 aaPredicted RBP13.79□□□□□ -0.2
TPM1-201ENST00000267996 ING3Q9NXR8 418 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
TPM1-201ENST00000267996 KALRNO60229 2985 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 OR5H14A6NHG9 310 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.78□□□□□ -0.2
TPM1-201ENST00000267996 IFNL4K9M1U5 179 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 SIRPB1O00241 398 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 CD55P08174 381 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 GSTT2P0CG29 244 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 CXCL3P19876 107 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 TNFAIP6P98066 277 aaPredicted RBP13.78□□□□□ -0.2
TPM1-201ENST00000267996 SURF2Q15527 256 aaPredicted RBP13.78□□□□□ -0.2
TPM1-201ENST00000267996 BEX5Q5H9J7 111 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 MUC20Q8N307 709 aaPredicted RBP13.78□□□□□ -0.2
TPM1-201ENST00000267996 SPICQ8N5J4 248 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 TMEM185AQ8NFB2 350 aa13.78□□□□□ -0.2
TPM1-201ENST00000267996 ZNF431Q8TF32 576 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms