RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZNF665Q9H7R5 613 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SDF2L1Q9HCN8 221 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 FAM60AQ9NP50 221 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SLC7A11Q9UPY5 501 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SHANK1Q9Y566 2161 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 E5RGE8 158 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 C11orf98E9PRG8 122 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 MSTNO14793 375 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 NXPH3O95157 252 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 MPIG6BO95866 241 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 AMY2BP19961 511 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 GCH1P30793 250 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 EGR4Q05215 589 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 TPTE2P1Q5T6R2 138 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 DTWD2Q8NBA8 298 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SUMF1Q8NBK3 374 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SLC24A4Q8NFF2 622 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 TMEM170AQ8WVE7 144 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 C8orf44Q96CB5 159 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SLC35E1Q96K37 410 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 CLUHP3Q96NS8 147 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 VSIRQ9H7M9 311 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 NSG2Q9Y328 171 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 LNP1A1A4G5 178 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 K7EP13 123 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 NUDT21O43809 227 aaKnown RBP7.64□□□□□ -1.19
VAPB-201ENST00000265619 FGF17O60258 216 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 STAG3L3P0CL85 134 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 ZNF43P17038 809 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 FSTP19883 344 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 CMPK1P30085 196 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 OR10J1P30954 320 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 IDH3GP51553 393 aaPredicted RBP7.64□□□□□ -1.19
VAPB-201ENST00000265619 EWSR1Q01844 656 aaKnown RBP eCLIP7.64□□□□□ -1.19
VAPB-201ENST00000265619 HHEXQ03014 270 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 TAF9Q16594 264 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 COL5A1-AS1Q5SY13 56 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 C1orf140Q5VVS0 124 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 LINC00346Q8IVM7 164 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 WDFY1Q8IWB7 410 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 NUDT10Q8NFP7 164 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 KTI12Q96EK9 354 aaPredicted RBP7.64□□□□□ -1.19
VAPB-201ENST00000265619 MS4A10Q96PG2 267 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 HDHD3Q9BSH5 251 aaPredicted RBP7.64□□□□□ -1.19
VAPB-201ENST00000265619 ABHD6Q9BV23 337 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 ZNF160Q9HCG1 818 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 G6PC2Q9NQR9 355 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 C1orf123Q9NWV4 160 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 B3GALT5Q9Y2C3 310 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SLC17A4Q9Y2C5 497 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 CXorf51AA0A1B0GTR3 108 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 LOC102723971A0A1B0GUV8 181 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 TMEM238C9JI98 176 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 SRSF10O75494 262 aaKnown RBP7.63□□□□□ -1.19
VAPB-201ENST00000265619 IGHV4-34P06331 123 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 OR3A4PP47883 348 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 CSNK1A1P48729 337 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 CSNK2A1P68400 391 aaPredicted RBP7.63□□□□□ -1.19
VAPB-201ENST00000265619 FDX2Q6P4F2 183 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 CSNK2A3Q8NEV1 391 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 OR2L3Q8NG85 312 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 TXN2Q99757 166 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 C19orf53Q9UNZ5 99 aaPredicted RBP7.63□□□□□ -1.19
VAPB-201ENST00000265619 GTF3C1Q12789 2109 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 GRIFINA4D1Z8 144 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 TNFSF13O75888 250 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 DDAH2O95865 285 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 CSTAP01040 98 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 CDC34P49427 236 aaPredicted RBP7.63□□□□□ -1.19
VAPB-201ENST00000265619 SNU13P55769 128 aaKnown RBP7.63□□□□□ -1.19
VAPB-201ENST00000265619 ADIRFQ15847 76 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 KIAA0895LQ68EN5 471 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 SYT13Q7L8C5 426 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 VN1R4Q7Z5H5 301 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 MYPOPQ86VE0 399 aaPredicted RBP7.63□□□□□ -1.19
VAPB-201ENST00000265619 TMEM217Q8N7C4 229 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 OR51G1Q8NGK1 321 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 OR4C3Q8NH37 302 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 ZCCHC14Q8WYQ9 949 aaKnown RBP7.63□□□□□ -1.19
VAPB-201ENST00000265619 C1orf147Q96MC9 270 aaPredicted RBP7.63□□□□□ -1.19
VAPB-201ENST00000265619 P4HTMQ9NXG6 502 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 TRAV34A0A0B4J273 112 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 FOXS1O43638 330 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 CST7O76096 145 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 OPN1LWP04000 364 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 H2BFMP0C1H6 154 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 OR5G3P0C626 314 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 LINC00310P59036 64 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 ZNF117Q03924 483 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 ACTL10Q5JWF8 245 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 FBXL14Q8N1E6 418 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 VN1R17PQ8TDU5 208 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 SGCZQ96LD1 299 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 GPX7Q96SL4 187 aaPredicted RBP7.63□□□□□ -1.19
VAPB-201ENST00000265619 MAGT1Q9H0U3 335 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 ANAPC10Q9UM13 185 aa7.63□□□□□ -1.19
VAPB-201ENST00000265619 TMEM14DPA8MWL7 114 aa7.62□□□□□ -1.19
VAPB-201ENST00000265619 OR2J2O76002 312 aa7.62□□□□□ -1.19
VAPB-201ENST00000265619 CFIP05156 583 aa7.62□□□□□ -1.19
VAPB-201ENST00000265619 HIST1H1DP16402 221 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms