RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 TMEM218A2RU14 115 aa9.52□□□□□ -0.88
MSH3-201ENST00000265081 E5RGE8 158 aa9.52□□□□□ -0.88
MSH3-201ENST00000265081 GPM6AP51674 278 aa9.52□□□□□ -0.88
MSH3-201ENST00000265081 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.52□□□□□ -0.88
MSH3-201ENST00000265081 CCDC71LQ8N9Z2 235 aa9.52□□□□□ -0.88
MSH3-201ENST00000265081 PAPOLGQ9BWT3 736 aaKnown RBP9.52□□□□□ -0.88
MSH3-201ENST00000265081 HES4Q9HCC6 221 aa9.52□□□□□ -0.88
MSH3-201ENST00000265081 FAM86C1Q9NVL1 165 aa9.52□□□□□ -0.88
MSH3-201ENST00000265081 NSG2Q9Y328 171 aa9.52□□□□□ -0.88
MSH3-201ENST00000265081 POMT1Q9Y6A1 747 aa9.52□□□□□ -0.88
MSH3-201ENST00000265081 TRDCB7Z8K6 153 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 MPPED1O15442 326 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
MSH3-201ENST00000265081 CDS2O95674 445 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 HOXB5P09067 269 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.89
MSH3-201ENST00000265081 RPL12P30050 165 aaKnown RBP9.52□□□□□ -0.89
MSH3-201ENST00000265081 NUBP1P53384 320 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 EIF5AP63241 154 aaKnown RBP9.52□□□□□ -0.89
MSH3-201ENST00000265081 ZNF766Q5HY98 468 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 OR2A2Q6IF42 318 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 MRPL21Q7Z2W9 205 aaKnown RBP9.52□□□□□ -0.89
MSH3-201ENST00000265081 TP53RKQ96S44 253 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 SCRT1Q9BWW7 348 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 KCNIP3Q9Y2W7 256 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 TRAV24A0A0B4J272 114 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.52□□□□□ -0.89
MSH3-201ENST00000265081 LILRA1O75019 489 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 CEACAM4O75871 244 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 CTXN2P0C2S0 81 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 COX5AP20674 150 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 HAAOP46952 286 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 PLGLB1Q02325 96 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 LGI3Q8N145 548 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 PLPPR1Q8TBJ4 325 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 TSNAXQ99598 290 aaKnown RBP9.52□□□□□ -0.89
MSH3-201ENST00000265081 SPACA1Q9HBV2 294 aa9.52□□□□□ -0.89
MSH3-201ENST00000265081 ZNF732B4DXR9 585 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 ABCD4O14678 606 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 JTBO76095 146 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 CD5P06127 495 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 IGSF11Q5DX21 431 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 ZNF324BQ6AW86 544 aaPredicted RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 ATRAIDQ6UW56 229 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 LILRB1Q8NHL6 650 aaPredicted RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 TOLLIPQ9H0E2 274 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 TLNRD1Q9H1K6 362 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 TRGV5A0A0B4J1U4 118 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 GPR137BO60478 399 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 ATG12O94817 140 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 IFNA21P01568 189 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 UCP1P25874 307 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 DUSP1P28562 367 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 BRICD5Q6PL45 260 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 WDR86Q86TI4 376 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 ZNF573Q86YE8 665 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 SPERTQ8NA61 448 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 NANOS1Q8WY41 292 aaKnown RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 TAS2R3Q9NYW6 316 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 RCL1Q9Y2P8 373 aaKnown RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 C3orf85A0A1B0GTC6 90 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 SLC22A20A6NK97 555 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 SMPD2O60906 423 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 PLATP00750 562 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 SLC25A6P12236 298 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 CCL2P13500 99 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 TRIP6Q15654 476 aaKnown RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 RPL7L1Q6DKI1 246 aaKnown RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 LYZL2Q7Z4W2 148 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 MDP1Q86V88 176 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 MYPOPQ86VE0 399 aaPredicted RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 TMEM178AQ8NBL3 297 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 MS4A7Q9GZW8 240 aaPredicted RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 R4GN57 208 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 SYNGR1O43759 233 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 IGLV2-14P01704 120 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 MMP9P14780 707 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 GNG3P63215 75 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 PJVKQ0ZLH3 352 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 C3AR1Q16581 482 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 ZNF585AQ6P3V2 769 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 ODF3L1Q8IXM7 274 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 H1FOOQ8IZA3 346 aaPredicted RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 C1orf162Q8NEQ5 155 aaPredicted RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 OR11L1Q8NGX0 322 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 TAF9BQ9HBM6 251 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 IL36RNQ9UBH0 155 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 ZNF629Q9UEG4 869 aaPredicted RBP9.51□□□□□ -0.89
MSH3-201ENST00000265081 SPEF1Q9Y4P9 236 aa9.51□□□□□ -0.89
MSH3-201ENST00000265081 SDK1Q7Z5N4 2213 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 KIR2DS1A0A191URI9 304 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 IQCF6A8MYZ5 107 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 AQP7O14520 342 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 SPP1P10451 314 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 IL32P24001 234 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 MDH2P40926 338 aaKnown RBP9.5□□□□□ -0.89
MSH3-201ENST00000265081 KIR2DS4P43632 304 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 CAV2P51636 162 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 KIR2DS1Q14954 304 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms