RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 TSLPQ969D9 159 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 PYGO2Q9BRQ0 406 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 PBOV1Q9GZY1 135 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 ZNF701Q9NV72 531 aaPredicted RBP11.42□□□□□ -0.58
NUP54-201ENST00000264883 ZNF705FA8MVS1 300 aaPredicted RBP11.42□□□□□ -0.58
NUP54-201ENST00000264883 B4E171 279 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 IL6RP08887 468 aaPredicted RBP11.42□□□□□ -0.58
NUP54-201ENST00000264883 ZNF705DP0CH99 300 aaPredicted RBP11.42□□□□□ -0.58
NUP54-201ENST00000264883 ZNF705BP0CI00 300 aaPredicted RBP11.42□□□□□ -0.58
NUP54-201ENST00000264883 OMGP23515 440 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 CCR5P51681 352 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 BATFQ16520 125 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 TGIF2LYQ8IUE0 185 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 MAML2Q8IZL2 1156 aaPredicted RBP11.42□□□□□ -0.58
NUP54-201ENST00000264883 ZNF321PQ8N8H1 164 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 TMEM37Q8WXS4 190 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 KLHDC3Q9BQ90 382 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 NAA60Q9H7X0 242 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 PRDM6Q9NQX0 595 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 WNT16Q9UBV4 365 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 FREM3P0C091 2139 aa11.42□□□□□ -0.58
NUP54-201ENST00000264883 IGKV1D-8A0A087WSZ0 117 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 IFNL4K9M1U5 179 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 HPNP05981 417 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 PFN1P07737 140 aaKnown RBP11.41□□□□□ -0.58
NUP54-201ENST00000264883 JMJD7P0C870 316 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 GBGT1Q8N5D6 347 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 NECAP1Q8NC96 275 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 ST8SIA1Q92185 356 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 SLAMF6Q96DU3 332 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 GNPNAT1Q96EK6 184 aaPredicted RBP11.41□□□□□ -0.58
NUP54-201ENST00000264883 C18orf12Q96KH6 178 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 RTN4RQ9BZR6 473 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 OR2J1Q9GZK6 312 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 GAL3ST2Q9H3Q3 398 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 DNAJC4Q9NNZ3 241 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 SPTY2D1-AS1A0A0U1RR47 76 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 IGSF23A1L1A6 192 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 ZNF732B4DXR9 585 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 LCATP04180 440 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 ERVS71-1P61550 626 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 ABCA11PQ4W5N1 156 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.41□□□□□ -0.58
NUP54-201ENST00000264883 H1FNTQ75WM6 255 aaPredicted RBP11.41□□□□□ -0.58
NUP54-201ENST00000264883 PRR22Q8IZ63 422 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 GPER1Q99527 375 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 OR51B6Q9H340 312 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 COPS7AQ9UBW8 275 aa11.41□□□□□ -0.58
NUP54-201ENST00000264883 LILRA5A6NI73 299 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 ZFP92A6NM28 416 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 PRKNO60260 465 aaPredicted RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 GZMHP20718 246 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 BLVRBP30043 206 aaPredicted RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 TNFSF10P50591 281 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 SUMO3P55854 103 aaPredicted RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 KIAA0895LQ68EN5 471 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 C16orf82Q7Z2V1 217 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 OR5AS1Q8N127 324 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 CPEB3Q8NE35 698 aaKnown RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 RNASE8Q8TDE3 154 aaKnown RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 WFIKKN1Q96NZ8 548 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 TBX15Q96SF7 602 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 PECRQ9BY49 303 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 TPSD1Q9BZJ3 242 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 WWTR1Q9GZV5 400 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 GPR27Q9NS67 375 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 CISD1Q9NZ45 108 aaKnown RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 FUT9Q9Y231 359 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 ZFP30Q9Y2G7 519 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 MRPS17Q9Y2R5 130 aaKnown RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 ARHGEF17Q96PE2 2063 aaPredicted RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 MS4A18H0YCH9 400 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 ITGB1BP1O14713 200 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 RRP8O43159 456 aaKnown RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 CELA2BP08218 269 aaPredicted RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 GLI4P10075 376 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 FASLGP48023 281 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 FAM3BP58499 235 aaPredicted RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 GNB2P62879 340 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 RUNX1Q01196 453 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 MS4A18Q3C1V0 323 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 DPPA3Q6W0C5 159 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 LRP11Q86VZ4 500 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 SFTPA2Q8IWL1 248 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 ZNF100Q8IYN0 542 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 LGI3Q8N145 548 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 FAM89BQ8N5H3 189 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 LRTM2Q8N967 370 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 TSTD1Q8NFU3 115 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 TMEM171Q8WVE6 324 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 RTN4IP1Q8WWV3 396 aaPredicted RBP11.4□□□□□ -0.58
NUP54-201ENST00000264883 TOMM40LQ969M1 308 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 KLHL13Q9P2N7 655 aa11.4□□□□□ -0.58
NUP54-201ENST00000264883 YLPM1P49750 1951 aaKnown RBP11.4□□□□□ -0.59
NUP54-201ENST00000264883 C19orf67A6NJJ6 358 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 WNT5AP41221 380 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 MPV17LQ2QL34 196 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 ACOT6Q3I5F7 207 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms