RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ZNF92Q03936 586 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 SPINK9Q5DT21 86 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 INTS12Q96CB8 462 aaKnown RBP14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 ARGFXA6NJG6 315 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 IGHV3-13P01766 116 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 IGHV3-7P01780 117 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 DSCR4P56555 118 aaPredicted RBP14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 IGFBP7Q16270 282 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 CXorf66Q5JRM2 361 aaPredicted RBP14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 C9orf152Q5JTZ5 239 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 CNEP1R1Q8N9A8 125 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 FER1L6-AS2Q96M78 137 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 SPSB2Q99619 263 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 DEFB127Q9H1M4 99 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 CCL28Q9NRJ3 127 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 SLC7A10Q9NS82 523 aa14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 RCC2Q9P258 522 aaKnown RBP14.09□□□□□ -0.15
PDZRN3-201ENST00000263666 AKAP6Q13023 2319 aa14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 YIF1AO95070 293 aa14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 CTSDP07339 412 aaPredicted RBP14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 COL19A1Q14993 1142 aa14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 ZNF468Q5VIY5 522 aaPredicted RBP14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 RPUSD4Q96CM3 377 aaKnown RBP14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 IFT22Q9H7X7 185 aa14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 DNAJB11Q9UBS4 358 aa14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 GHRLQ9UBU3 117 aa14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 ERRFI1Q9UJM3 462 aaPredicted RBP14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 BOKQ9UMX3 212 aaPredicted RBP14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 GAB2Q9UQC2 676 aa14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 THADAQ6YHU6 1953 aa14.08□□□□□ -0.15
PDZRN3-201ENST00000263666 CBR3O75828 277 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 IL2RAP01589 272 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 METTL15P1P0C7V9 234 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 GSK3AP49840 483 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 SUPT4H1P63272 117 aaKnown RBP14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 GAPTQ8N292 157 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF709Q8N972 641 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 OR10AD1Q8NGE0 317 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 CLDN23Q96B33 292 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 C3orf85A0A1B0GTC6 90 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 GPR137BO60478 399 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 PMP22Q01453 160 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 OR2T2Q6IF00 324 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 OR1K1Q8NGR3 316 aa14.08□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF816-ZNF321PA0A0X1KG74 233 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 FABP1P07148 127 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 FCGR3AP08637 254 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 IFI6P09912 130 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 TRIP6Q15654 476 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 LHFPL2Q6ZUX7 228 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 TBC1D26Q86UD7 250 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 CARFQ8N187 725 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 FRZBQ92765 325 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 FAM117AQ9C073 453 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 UCK1Q9HA47 277 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF107Q9UII5 783 aaPredicted RBP14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 PDCD6O75340 191 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 SULT1A1P50225 295 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 POC1AQ8NBT0 407 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 SAT2Q96F10 170 aaPredicted RBP14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 IGLV3-19P01714 112 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 CD46P15529 392 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 DYNLT3P51808 116 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 TRA2AQ13595 282 aaKnown RBP eCLIP14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF239Q16600 458 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF561Q8N587 486 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 OR1J1Q8NGS3 322 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 OR10J5Q8NHC4 309 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 SAP25Q8TEE9 199 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 TAAR9Q96RI9 348 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 ABHD14AQ9BUJ0 271 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 UNKLQ9H9P5 680 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 LDLRAD4O15165 306 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 LY86O95711 162 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 PPYP01298 95 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 HES3Q5TGS1 186 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 LIAT1Q6ZQX7 453 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 SPSB1Q96BD6 273 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 OBP2BQ9NPH6 170 aa14.07□□□□□ -0.16
PDZRN3-201ENST00000263666 MYO15AQ9UKN7 3530 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 ZNF587BE7ETH6 402 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 SCAF4O95104 1147 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 MECP2P51608 486 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 ADAMTS17Q8TE56 1095 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 LYZL4Q96KX0 146 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 CHST1O43916 411 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 NXPH2O95156 264 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 SCTP09683 121 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 BCL3P20749 454 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 ATP6V0CP27449 155 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 RAB35Q15286 201 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 SSX9Q7RTT3 188 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 SRXN1Q9BYN0 137 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 CALCRP30988 508 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 IL2RGP31785 369 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 EDDM3AQ14507 147 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 MPV17LQ2QL34 196 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 SLC35B3Q9H1N7 401 aa14.06□□□□□ -0.16
PDZRN3-201ENST00000263666 MED13LQ71F56 2210 aa14.05□□□□□ -0.16
PDZRN3-201ENST00000263666 TOX3O15405 576 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms