RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 OR5H2Q8NGV7 314 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 PRRT1Q99946 306 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 GLS2Q9UI32 602 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 SCP2D1Q9UJQ7 156 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 FLVCR2Q9UPI3 526 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 C19orf84I3L1E1 186 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 SIRPB1O00241 398 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 CSN2P05814 226 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 IGFBP2P18065 325 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 LMO1P25800 156 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 AGAP6Q5VW22 663 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 SHEQ5VZ18 495 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 IDO2Q6ZQW0 420 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 NEK7Q8TDX7 302 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 GINS4Q9BRT9 223 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 ANXA10Q9UJ72 324 aa19.26■□□□□ 0.67
SMARCB1-201ENST00000263121 PFDN1O60925 122 aa19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 DHFRP00374 187 aa19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 CEBPDP49716 269 aaPredicted RBP19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 SWI5Q1ZZU3 235 aa19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 PAN3Q58A45 887 aaKnown RBP19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 ZCCHC24Q8N2G6 241 aaKnown RBP19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 ARRDC1Q8N5I2 433 aa19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 FAM222BQ8WU58 562 aa19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 ETAA1Q9NY74 926 aa19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 OR14J1Q9UGF5 321 aa19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 ALG5Q9Y673 324 aa19.25■□□□□ 0.67
SMARCB1-201ENST00000263121 ARPC1BO15143 372 aaKnown RBP19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 TNFRSF1AP19438 455 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 CCL8P80075 99 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 SRSF7Q16629 238 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 CHRFAM7AQ494W8 412 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 Q6ZS49 121 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 OR13C8Q8NGS7 320 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 CHAC2Q8WUX2 184 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 MS4A5Q9H3V2 200 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 RIMS4Q9H426 269 aaPredicted RBP19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 SEBOXQ9HB31 216 aaPredicted RBP19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 DYNLRB1Q9NP97 96 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 TREM2Q9NZC2 230 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 RNF7Q9UBF6 113 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 NPTNQ9Y639 398 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 TRBV6-6A0A0A6YYG2 114 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 IFNL4K9M1U5 179 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 PEX14O75381 377 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 IFNA6P05013 189 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 MDH2P40926 338 aaKnown RBP19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 MECP2P51608 486 aaKnown RBP19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 CARTPTQ16568 116 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 OVCH2Q7RTZ1 564 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 MUC15Q8N387 334 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 SLC25A21Q9BQT8 299 aaPredicted RBP19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 ZNF286AQ9HBT8 521 aa19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 CHMP1AQ9HD42 196 aaPredicted RBP19.24■□□□□ 0.67
SMARCB1-201ENST00000263121 RFPL4AA6NLU0 287 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 RFPL4AL1F8VTS6 287 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 PYCARD-AS1I3L0S3 204 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 OR3A3P47888 321 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 CDK10Q15131 360 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 SCGB2B2Q4G0G5 96 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 OR11L1Q8NGX0 322 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 MRPL30Q8TCC3 161 aaKnown RBP19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 MRGPRFQ96AM1 343 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 EGLN1Q9GZT9 426 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 TMEM165Q9HC07 324 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 Q9N2K0 584 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 PPP1R3CQ9UQK1 317 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 WIPI2Q9Y4P8 454 aa19.23■□□□□ 0.67
SMARCB1-201ENST00000263121 ICE1Q9Y2F5 2266 aa19.22■□□□□ 0.67
SMARCB1-201ENST00000263121 C7orf66A4D0T2 115 aa19.22■□□□□ 0.67
SMARCB1-201ENST00000263121 PSG2P11465 335 aa19.22■□□□□ 0.67
SMARCB1-201ENST00000263121 GAPTQ8N292 157 aa19.22■□□□□ 0.67
SMARCB1-201ENST00000263121 PLPPR1Q8TBJ4 325 aa19.22■□□□□ 0.67
SMARCB1-201ENST00000263121 NEURL2Q9BR09 285 aa19.22■□□□□ 0.67
SMARCB1-201ENST00000263121 PPA2Q9H2U2 334 aa19.22■□□□□ 0.67
SMARCB1-201ENST00000263121 EHFQ9NZC4 300 aa19.22■□□□□ 0.67
SMARCB1-201ENST00000263121 EPG5Q9HCE0 2579 aa19.21■□□□□ 0.67
SMARCB1-201ENST00000263121 PSPNO60542 156 aa19.21■□□□□ 0.67
SMARCB1-201ENST00000263121 ARPC4P59998 168 aa19.21■□□□□ 0.67
SMARCB1-201ENST00000263121 ZNF880Q6PDB4 577 aa19.21■□□□□ 0.67
SMARCB1-201ENST00000263121 CD177Q8N6Q3 437 aa19.21■□□□□ 0.67
SMARCB1-201ENST00000263121 BOLLQ8N9W6 283 aaKnown RBP19.21■□□□□ 0.67
SMARCB1-201ENST00000263121 GIMAP1Q8WWP7 306 aa19.21■□□□□ 0.67
SMARCB1-201ENST00000263121 SAP30LQ9HAJ7 183 aa19.21■□□□□ 0.67
SMARCB1-201ENST00000263121 DECR2Q9NUI1 292 aa19.21■□□□□ 0.67
SMARCB1-201ENST00000263121 IGKV1D-17A0A075B6S4 117 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 OR2AT4A6NND4 320 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 POM121CA8CG34 1229 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 SDCBPO00560 298 aaPredicted RBP19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 GRK1Q15835 563 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 ZNF497Q6ZNH5 498 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 C20orf204Q6ZNR8 217 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 DNAJB11Q9UBS4 358 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 A0A0A6YYJ9 748 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 PRAF2O60831 178 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 CYB5R3P00387 301 aaPredicted RBP19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 TFF1P04155 84 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 PRDX2P32119 198 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 CD80P33681 288 aa19.2■□□□□ 0.66
SMARCB1-201ENST00000263121 SNRPD2P62316 118 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms