RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 AKIP1Q9NQ31 210 aa13.04□□□□□ -0.32
GYPC-201ENST00000259254 ING3Q9NXR8 418 aa13.04□□□□□ -0.32
GYPC-201ENST00000259254 METRNQ9UJH8 293 aa13.04□□□□□ -0.32
GYPC-201ENST00000259254 ZNF222Q9UK12 451 aa13.04□□□□□ -0.32
GYPC-201ENST00000259254 TRAV24A0A0B4J272 114 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 TMEM235A6NFC5 223 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 SLC33A1O00400 549 aaPredicted RBP13.03□□□□□ -0.32
GYPC-201ENST00000259254 MFNGO00587 321 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 ADAM20O43506 726 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 GSTP1P09211 210 aaKnown RBP13.03□□□□□ -0.32
GYPC-201ENST00000259254 PTHLHP12272 177 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 PAX1P15863 534 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 ETV6P41212 452 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 GNG2P59768 71 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 RBM39Q14498 530 aaKnown RBP13.03□□□□□ -0.32
GYPC-201ENST00000259254 DEFB113Q30KQ7 82 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 ZNF260Q3ZCT1 412 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 SLC36A1Q7Z2H8 476 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 FAM216BQ8N7L0 139 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 TMEM185AQ8NFB2 350 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 PPP1R35Q8TAP8 253 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 FAM168AQ92567 244 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 GCDHQ92947 438 aaPredicted RBP13.03□□□□□ -0.32
GYPC-201ENST00000259254 MBD6Q96DN6 1003 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 GAFA1Q96PS6 74 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 SULT4A1Q9BR01 284 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 TMEM246Q9BRR3 403 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 WDR12Q9GZL7 423 aaKnown RBP13.03□□□□□ -0.32
GYPC-201ENST00000259254 CHST6Q9GZX3 395 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 NARFLQ9H6Q4 476 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 IFT22Q9H7X7 185 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 CHMP1AQ9HD42 196 aaPredicted RBP13.03□□□□□ -0.32
GYPC-201ENST00000259254 RCC2Q9P258 522 aaKnown RBP13.03□□□□□ -0.32
GYPC-201ENST00000259254 RABL2AQ9UBK7 228 aaPredicted RBP13.03□□□□□ -0.32
GYPC-201ENST00000259254 HSF4Q9ULV5 492 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 RABL2BQ9UNT1 228 aa13.03□□□□□ -0.32
GYPC-201ENST00000259254 TMEM82A0PJX8 343 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 SERPINE3A8MV23 424 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 TMPRSS2O15393 492 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 NDUFA2O43678 99 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 HLA-DQB1P01920 261 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 CD3GP09693 182 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 CSF3P09919 207 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 PTBP1P26599 531 aaKnown RBP eCLIP13.02□□□□□ -0.339e-7■■■■□ 19.4
GYPC-201ENST00000259254 PRSS3P35030 304 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 IL13RA1P78552 427 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 ATXN7L3Q14CW9 347 aaPredicted RBP13.02□□□□□ -0.33
GYPC-201ENST00000259254 OLFML2AQ68BL7 652 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 ZNF788Q6ZQV5 615 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 DCDC5Q6ZRR9 648 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 ZNF561Q8N587 486 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 SPICQ8N5J4 248 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 DYRK2Q92630 601 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 SDSLQ96GA7 329 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 MED30Q96HR3 178 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 CYYR1Q96J86 154 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 ABHD1Q96SE0 405 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 PIMREGQ9BSJ6 248 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 SEBOXQ9HB31 216 aaPredicted RBP13.02□□□□□ -0.33
GYPC-201ENST00000259254 ETAA1Q9NY74 926 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 AK3Q9UIJ7 227 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 ELF5Q9UKW6 265 aaPredicted RBP13.02□□□□□ -0.33
GYPC-201ENST00000259254 PCDHB10Q9UN67 800 aa13.02□□□□□ -0.33
GYPC-201ENST00000259254 A0A1B0GW55 424 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 SIGLEC5O15389 551 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 PSPNO60542 156 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 TPPPO94811 219 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 GLAP06280 429 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 DUX4L2P0CJ85 424 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 DUX4L3P0CJ86 424 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 DUX4L4P0CJ87 422 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 DUX4L5P0CJ88 424 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 DUX4L6P0CJ89 424 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 DUX4L7P0CJ90 424 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 RPS2P15880 293 aaKnown RBP13.01□□□□□ -0.33
GYPC-201ENST00000259254 AMY2BP19961 511 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 LMO1P25800 156 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 GUCA2AQ02747 115 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 EDDM3AQ14507 147 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 GRK1Q15835 563 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 PNLIPRP3Q17RR3 467 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 TMEM155Q4W5P6 130 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 ATPAF1Q5TC12 328 aaPredicted RBP13.01□□□□□ -0.33
GYPC-201ENST00000259254 HACD4Q5VWC8 232 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 DUX4L9Q6RFH8 374 aaPredicted RBP13.01□□□□□ -0.33
GYPC-201ENST00000259254 LYPD2Q6UXB3 125 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 ZNRF1Q8ND25 227 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 OR4S1Q8NGB4 309 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 NUDCD2Q8WVJ2 157 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 SNX22Q96L94 193 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 CMSS1Q9BQ75 279 aaKnown RBP13.01□□□□□ -0.33
GYPC-201ENST00000259254 SOSTQ9BQB4 213 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 DNTTIP1Q9H147 329 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 DUX4Q9UBX2 424 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 KCNK7Q9Y2U2 307 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 MAB21L2Q9Y586 359 aa13.01□□□□□ -0.33
GYPC-201ENST00000259254 CEACAM18A8MTB9 384 aa13□□□□□ -0.33
GYPC-201ENST00000259254 J3QRK9 145 aa13□□□□□ -0.33
GYPC-201ENST00000259254 NDUFS8O00217 210 aa13□□□□□ -0.33
GYPC-201ENST00000259254 NDUFB3O43676 98 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms