RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ADGRG4Q8IZF6 3080 aa16.04■□□□□ 0.16
TRIM47-201ENST00000254816 POM121CA8CG34 1229 aa16.04■□□□□ 0.16
TRIM47-201ENST00000254816 HSPB6O14558 160 aa16.04■□□□□ 0.16
TRIM47-201ENST00000254816 HOXA4Q00056 320 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-201ENST00000254816 PRAMEF6Q5VXH4 476 aa16.04■□□□□ 0.16
TRIM47-201ENST00000254816 KDF1Q8NAX2 398 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-201ENST00000254816 MYOZ1Q9NP98 299 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-201ENST00000254816 SPEF1Q9Y4P9 236 aa16.04■□□□□ 0.16
TRIM47-201ENST00000254816 ICE1Q9Y2F5 2266 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 SDCBPO00560 298 aaPredicted RBP16.03■□□□□ 0.16
TRIM47-201ENST00000254816 CA11O75493 328 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 ZNF250P15622 560 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 FUT3P21217 361 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 GLRXP35754 106 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 LRRC37A5PQ49AS3 106 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 ZNF826PQ6ZT77 177 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 SLC25A42Q86VD7 318 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 FAM58AQ8N1B3 248 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 OR5M8Q8NGP6 311 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 ANGPTL6Q8NI99 470 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 SEC22AQ96IW7 307 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 IFNA6P05013 189 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 SFTPCP11686 197 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 AKR1C4P17516 323 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 ZBTB25P24278 435 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 CCDC28AQ8IWP9 274 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 C1orf174Q8IYL3 243 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 CASTOR1Q8WTX7 329 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 TMEM171Q8WVE6 324 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 MFFQ9GZY8 342 aa16.03■□□□□ 0.16
TRIM47-201ENST00000254816 TPRP12270 2363 aaKnown RBP16.02■□□□□ 0.16
TRIM47-201ENST00000254816 FAM90A27PA6NNH2 459 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 RRASP10301 218 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 VAMP1P23763 118 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 LYG2Q86SG7 212 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 OR5H2Q8NGV7 314 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 COQ8AQ8NI60 647 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 WFIKKN1Q96NZ8 548 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 PDCD10Q9BUL8 212 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 CXXC4Q9H2H0 198 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 UFSP2Q9NUQ7 469 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 NBASA2RRP1 2371 aa16.02■□□□□ 0.16
TRIM47-201ENST00000254816 PKD1L2Q7Z442 2459 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.02■□□□□ 0.15
TRIM47-201ENST00000254816 DPRXA6NFQ7 191 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 RFPL4AA6NLU0 287 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 RFPL4AL1F8VTS6 287 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 AANATQ16613 207 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 GSG1LQ6UXU4 331 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 C11orf53Q8IXP5 236 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 OR2Z1Q8NG97 314 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 OR13G1Q8NGZ3 307 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 MARCH1Q8TCQ1 289 aa16.02■□□□□ 0.15
TRIM47-201ENST00000254816 C9orf170A2RU37 121 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 TMEM8BA6NDV4 472 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 TMEM210A6NLX4 147 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM25EA8MYX2 175 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FCGR3AP08637 254 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 TBPP20226 339 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 IL13RA1P78552 427 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 TMEM108Q6UXF1 575 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 Q6ZPA2 131 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 ZDHHC22Q8N966 263 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 CXorf58Q96LI9 332 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 NKX2-6A6NCS4 301 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A10PA6NDY2 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A18PA6NE21 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A16PA6NEW6 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 OR5H14A6NHG9 310 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A20PA6NIJ5 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A8PA6NJQ4 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A7PA6NKC0 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A22PA8MWA6 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A12PA8MX19 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A5PA8MXJ8 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A23PA8MXZ1 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 ABCD4O14678 606 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 HS3ST1O14792 307 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A15PP0C7V4 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A13PP0C7W8 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A14PP0C7W9 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 FAM90A24PP0C7X0 464 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 KLF3P57682 345 aaPredicted RBP16.01■□□□□ 0.15
TRIM47-201ENST00000254816 BSPH1Q075Z2 132 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 SMG1Q96Q15 3661 aaKnown RBP16.01■□□□□ 0.15
TRIM47-201ENST00000254816 MRPL37Q9BZE1 423 aaKnown RBP16.01■□□□□ 0.15
TRIM47-201ENST00000254816 PLCE1Q9P212 2302 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 POLDIP2Q9Y2S7 368 aa16.01■□□□□ 0.15
TRIM47-201ENST00000254816 KALRNO60229 2985 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 A6NLC8 198 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 SPDEFO95238 335 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 CRYZL1O95825 349 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 IGHV3-13P01766 116 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 PGA5P0DJD9 388 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 RPA2P15927 270 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 ERVK11-1P61568 191 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 ADORA2A-AS1P86434 159 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 CDSNQ15517 529 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 MPV17LQ2QL34 196 aa16■□□□□ 0.15
TRIM47-201ENST00000254816 CHRFAM7AQ494W8 412 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms