RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ZNF716A6NP11 495 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 TCAPO15273 167 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 PTTG1IPP53801 180 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 COL13A1Q5TAT6 717 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF770Q6IQ21 691 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-201ENST00000254630 OR1L1Q8NH94 360 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ZP3P21754 424 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 HLA-DRB3P79483 266 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 GAB4Q2WGN9 574 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 RNASEKQ6P5S7 137 aaKnown RBP7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ETV3LQ6ZN32 361 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 SPICQ8N5J4 248 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 OPN3Q9H1Y3 402 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ASCL3Q9NQ33 180 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 PSME4Q14997 1843 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 C16orf97H3BN30 126 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 CTDSPLO15194 276 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 CTSDP07339 412 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-201ENST00000254630 FTH1P19P0C7X4 201 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 DHRS2Q13268 280 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 RAB32Q13637 225 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 GUK1Q16774 197 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ISXQ2M1V0 245 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-201ENST00000254630 DMKNQ6E0U4 476 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ZBTB44Q8NCP5 570 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 OR10G4Q8NGN3 311 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 OR10G9Q8NGN4 311 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 OR10G7Q8NGN6 311 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 NOL4LQ96MY1 436 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-201ENST00000254630 MASP2O00187 686 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 INHBBP09529 407 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 PAX5Q02548 391 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 OR10A7Q8NGE5 316 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 SLC25A22Q9H936 323 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 GPR27Q9NS67 375 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 TRIM77I1YAP6 450 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 GYPAP02724 150 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 FGF8P55075 233 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-201ENST00000254630 C1QL3Q5VWW1 255 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 DHRS7BQ6IAN0 325 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-201ENST00000254630 PDPNQ86YL7 162 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 VSTM2AQ8TAG5 236 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 SLIRPQ9GZT3 109 aaKnown RBP7.65□□□□□ -1.18
PTCD3-201ENST00000254630 MANBALQ9NQG1 85 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 MAP1LC3B2A6NCE7 125 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 MBPP02686 304 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-201ENST00000254630 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 LIAT1Q6ZQX7 453 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 TMEM18Q96B42 140 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 MAP1LC3BQ9GZQ8 125 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 SLC52A3Q9NQ40 469 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 PLSCR3Q9NRY6 295 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 SEMA7AO75326 666 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 P2RY1P47900 373 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 GABRA6Q16445 453 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 TINAGQ9UJW2 476 aa7.65□□□□□ -1.18
PTCD3-201ENST00000254630 RPL36A-HNRNPH2H7BZ11 118 aa7.65□□□□□ -1.19
PTCD3-201ENST00000254630 PLPPR5Q32ZL2 321 aa7.65□□□□□ -1.19
PTCD3-201ENST00000254630 PIGYQ3MUY2 71 aa7.65□□□□□ -1.19
PTCD3-201ENST00000254630 FBXW9Q5XUX1 488 aa7.65□□□□□ -1.19
PTCD3-201ENST00000254630 RBPMS2Q6ZRY4 209 aaKnown RBP7.65□□□□□ -1.19
PTCD3-201ENST00000254630 SLC25A10Q9UBX3 287 aaPredicted RBP7.65□□□□□ -1.19
PTCD3-201ENST00000254630 PRSS44E7EML9 344 aa7.65□□□□□ -1.19
PTCD3-201ENST00000254630 PMCHP20382 165 aa7.65□□□□□ -1.19
PTCD3-201ENST00000254630 ZNF680Q8NEM1 530 aa7.65□□□□□ -1.19
PTCD3-201ENST00000254630 TMEM208Q9BTX3 173 aa7.65□□□□□ -1.19
PTCD3-201ENST00000254630 PRR13Q9NZ81 148 aa7.65□□□□□ -1.19
PTCD3-201ENST00000254630 CDIPTO14735 213 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 FFAR1O14842 300 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 SOCS1O15524 211 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 SP9P0CG40 484 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 NFAM1Q8NET5 270 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-201ENST00000254630 SLC2A8Q9NY64 477 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 DTX4Q9Y2E6 619 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 IGKV1D-16P01601 117 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 CD200P41217 278 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 ZFP36L2P47974 494 aaKnown RBP7.64□□□□□ -1.19
PTCD3-201ENST00000254630 PRSS54Q6PEW0 395 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 TGIF2LXQ8IUE1 241 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 TMEM52Q8NDY8 209 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 DYNLRB2Q8TF09 96 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 ZNF501Q96CX3 271 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-201ENST00000254630 ZMIZ1Q9ULJ6 1067 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 ADRA2AP08913 450 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 KHDC3LQ587J8 217 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 C19orf35Q6ZS72 473 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 ZAR1Q86SH2 424 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 MAP6Q96JE9 813 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 HEXA-AS1Q9H8Q6 139 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 FOXS1O43638 330 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 IL11P20809 199 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 RPL13AP40429 203 aaKnown RBP7.64□□□□□ -1.19
PTCD3-201ENST00000254630 SSX8Q7RTT4 187 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 POLR2AP24928 1970 aaKnown RBP7.64□□□□□ -1.19
PTCD3-201ENST00000254630 C1QAP02745 245 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 TMEM241Q24JQ0 296 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 KRTCAP3Q53RY4 240 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 SPRED2Q7Z698 418 aa7.64□□□□□ -1.19
PTCD3-201ENST00000254630 GAPTQ8N292 157 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms