RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ZNF714Q96N38 554 aa19.91■□□□□ 0.78
SDF2L1-201ENST00000248958 POMT1Q9Y6A1 747 aa19.91■□□□□ 0.78
SDF2L1-201ENST00000248958 A0A0U1RQK1 487 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 SLC33A1O00400 549 aaPredicted RBP19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 PIN1P1O15428 100 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 HOXA3O43365 443 aaPredicted RBP19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 DENRO43583 198 aaKnown RBP19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 MRPS14O60783 128 aaKnown RBP19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 MAS1P04201 325 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 MELTFP08582 738 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 DLX6P56179 175 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 MLLT11Q13015 90 aaPredicted RBP19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 TPBGQ13641 420 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 TRAM1Q15629 374 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 MIDNQ504T8 468 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 NHLRC3Q5JS37 347 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 TMED9Q9BVK6 235 aa19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 UBE2J1Q9Y385 318 aaPredicted RBP19.9■□□□□ 0.78
SDF2L1-201ENST00000248958 TMEM89A2RUT3 159 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 CDRT1O95170 752 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 PSMA1P25786 263 aaKnown RBP19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 DLX1P56177 255 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 GABARAPL2P60520 117 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 TBCEQ15813 527 aaPredicted RBP19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 HCP5Q6MZN7 132 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 LINC00596Q86U02 117 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 OSR2Q8N2R0 312 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 JAGN1Q8N5M9 183 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 OR10K1Q8NGX5 313 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 SSMEM1Q8WWF3 244 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 GCDHQ92947 438 aaPredicted RBP19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 DUX5Q96PT3 197 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 NR1H4Q96RI1 486 aaPredicted RBP19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 PPA2Q9H2U2 334 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 TCF7L1Q9HCS4 588 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 STAB1Q9NY15 2570 aa19.89■□□□□ 0.77
SDF2L1-201ENST00000248958 MEIOCA2RUB1 952 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 HSMCR30P0CW71 290 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 KCNJ3P48549 501 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 LIPKQ5VXJ0 399 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 C16orf87Q6PH81 154 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 TPRX1Q8N7U7 411 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 PHYHIPQ92561 330 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 CORO2AQ92828 525 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 FOXRED1Q96CU9 486 aaPredicted RBP19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 UQCC2Q9BRT2 126 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 DPAGT1Q9H3H5 408 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 ST3GAL6Q9Y274 331 aa19.88■□□□□ 0.77
SDF2L1-201ENST00000248958 TRGV10A0A0A0MS01 117 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 MAGEA13PA6NCF6 341 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 SC5DO75845 299 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 PAHP00439 452 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 GTF2F2P13984 249 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 CPEP16870 476 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 SERPINA2P20848 420 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 SAA4P35542 130 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 COMPP49747 757 aaPredicted RBP19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 PRB3Q04118 309 aaPredicted RBP19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 TCF23Q7RTU1 214 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 TRAPPC6BQ86SZ2 158 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 OR13D1Q8NGV5 346 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 MRPS24Q96EL2 167 aaKnown RBP19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 MGLLQ99685 303 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 NKX3-1Q99801 234 aaPredicted RBP19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 YTHDF1Q9BYJ9 559 aaKnown RBP19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 GAL3ST2Q9H3Q3 398 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 NCOR1P1Q9H4R4 102 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 IFT22Q9H7X7 185 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 TAS2R3Q9NYW6 316 aa19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 MRPS28Q9Y2Q9 187 aaKnown RBP19.87■□□□□ 0.77
SDF2L1-201ENST00000248958 A0A1W2PRD5 423 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 A0A1W2PRF3 423 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 A0A1W2PRM7 423 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 IGHV1-8P0DP01 117 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 HKR1P10072 659 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 RBM11P57052 281 aaKnown RBP19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 AESQ08117 197 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 MPV17LQ2QL34 196 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 PAN3Q58A45 887 aaKnown RBP19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 KRBOX4Q5JUW0 171 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 C12orf54Q6X4T0 127 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 ZNF367Q7RTV3 350 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 CEACAM19Q7Z692 300 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 MUL1Q969V5 352 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 ZNRD1Q9P1U0 126 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 GHRLQ9UBU3 117 aa19.86■□□□□ 0.77
SDF2L1-201ENST00000248958 IER3P46695 156 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 LGALS4P56470 323 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 RPL15P61313 204 aaKnown RBP19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 FOXL1Q12952 345 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 PIGYQ3MUY2 71 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 SLC22A6Q4U2R8 563 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 HSD17B12Q53GQ0 312 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 GLT8D1Q68CQ7 371 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 AWAT2Q6E213 333 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 GLIPR1L1Q6UWM5 242 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 LYPD6Q86Y78 171 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 PNKDQ8N490 385 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 BARHL1Q9BZE3 327 aa19.85■□□□□ 0.77
SDF2L1-201ENST00000248958 SLITRK2Q9H156 845 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms