RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 MYOZ1Q9NP98 299 aaPredicted RBP12.84□□□□□ -0.35
HDHD3-201ENST00000238379 VSIG4Q9Y279 399 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 hCG_1807616A0A1W2PRN6 198 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 CEACAM18A8MTB9 384 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 SNRPGP15A8MWD9 76 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 SLC33A1O00400 549 aaPredicted RBP12.83□□□□□ -0.35
HDHD3-201ENST00000238379 SH2D1BO14796 132 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 IGHV1-46P01743 117 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 GNLYP22749 145 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 ARPC4P59998 168 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 TSPAN5P62079 268 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 RBM39Q14498 530 aaKnown RBP12.83□□□□□ -0.35
HDHD3-201ENST00000238379 FCN2Q15485 313 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 GRK1Q15835 563 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 SRSF7Q16629 238 aaKnown RBP eCLIP12.83□□□□□ -0.35
HDHD3-201ENST00000238379 Q6ZS49 121 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 TMEM17Q86X19 198 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 ZDHHC22Q8N966 263 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 NEK7Q8TDX7 302 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 ZNF286AQ9HBT8 521 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 RANGRFQ9HD47 186 aaPredicted RBP12.83□□□□□ -0.35
HDHD3-201ENST00000238379 ZDHHC8Q9ULC8 765 aa12.83□□□□□ -0.35
HDHD3-201ENST00000238379 RELNP78509 3460 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 GLRA1P23415 457 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 RBMXP38159 391 aaKnown RBP12.83□□□□□ -0.36
HDHD3-201ENST00000238379 GATA4P43694 442 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 CD83Q01151 205 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 CHD3Q12873 2000 aaKnown RBP12.83□□□□□ -0.36
HDHD3-201ENST00000238379 C4orf17Q53FE4 359 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 AADACL3Q5VUY0 350 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 ZNF626Q68DY1 528 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 FIP1L1Q6UN15 594 aaKnown RBP12.83□□□□□ -0.36
HDHD3-201ENST00000238379 TMED4Q7Z7H5 227 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 OR11H7Q8NGC8 314 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 OR10Z1Q8NGY1 313 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 LRRC29Q8WV35 223 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 ITLN1Q8WWA0 313 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 CAPSLQ8WWF8 208 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.36
HDHD3-201ENST00000238379 GPN1Q9HCN4 374 aaPredicted RBP12.83□□□□□ -0.36
HDHD3-201ENST00000238379 CHMP1AQ9HD42 196 aaPredicted RBP12.83□□□□□ -0.36
HDHD3-201ENST00000238379 Q9N2K0 584 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 ETAA1Q9NY74 926 aa12.83□□□□□ -0.36
HDHD3-201ENST00000238379 CACNA1BQ00975 2339 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 E7EQL1 145 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 SIRPB1O00241 398 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 HAND1O96004 215 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 KNG1P01042 644 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 LMO1P25800 156 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 ZNF660Q6AZW8 331 aaPredicted RBP12.82□□□□□ -0.36
HDHD3-201ENST00000238379 OR52B4Q8NGK2 314 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 MARCH1Q8TCQ1 289 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 FYTTD1Q96QD9 318 aaKnown RBP12.82□□□□□ -0.36
HDHD3-201ENST00000238379 NECAP2Q9NVZ3 263 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 IL19Q9UHD0 177 aa12.82□□□□□ -0.36
HDHD3-201ENST00000238379 TRBV6-6A0A0A6YYG2 114 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 TUBAL3A6NHL2 446 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 VSTM5A8MXK1 200 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 SRRM5B3KS81 715 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.81□□□□□ -0.36
HDHD3-201ENST00000238379 SSNA1O43805 119 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 CREBL2O60519 120 aaPredicted RBP12.81□□□□□ -0.36
HDHD3-201ENST00000238379 CD3EP07766 207 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 ADH4P08319 380 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 OR4E1P0C645 316 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 SULT1A3P0DMM9 295 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 SULT1A4P0DMN0 295 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 OR5H8P0DN80 308 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 SERPINF1P36955 418 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 CEBPDP49716 269 aaPredicted RBP12.81□□□□□ -0.36
HDHD3-201ENST00000238379 NPY4RP50391 375 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 TNFAIP6P98066 277 aaPredicted RBP12.81□□□□□ -0.36
HDHD3-201ENST00000238379 TLE1Q04724 770 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 PAN3Q58A45 887 aaKnown RBP12.81□□□□□ -0.36
HDHD3-201ENST00000238379 SHEQ5VZ18 495 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 C20orf204Q6ZNR8 217 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 C17orf107Q6ZR85 190 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 MOGAT3Q86VF5 341 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 GCSAMQ8N6F7 178 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 MRPL30Q8TCC3 161 aaKnown RBP12.81□□□□□ -0.36
HDHD3-201ENST00000238379 CCDC107Q8WV48 283 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 NEUROG1Q92886 237 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 LIME1Q9H400 295 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 RASL12Q9NYN1 266 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 TREM2Q9NZC2 230 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 OR14J1Q9UGF5 321 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 OR5H14A6NHG9 310 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 SIAH2O43255 324 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 LHBP01229 141 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 GSTT2P0CG29 244 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 EGR1P18146 543 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 CXCL3P19876 107 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 SMIM21Q3B7S5 101 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 BEX5Q5H9J7 111 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 DHRS11Q6UWP2 260 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 PEG10Q86TG7 708 aaKnown RBP12.81□□□□□ -0.36
HDHD3-201ENST00000238379 SLC25A42Q86VD7 318 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 PLPPR1Q8TBJ4 325 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 TMEM165Q9HC07 324 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 ZNF69Q9UC07 566 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms