RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ZNF732B4DXR9 585 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 CYB5BO43169 146 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 CST7O76096 145 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 DKK1O94907 266 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 TRGC2P03986 189 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 SOD3P08294 240 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 FKBP2P26885 142 aaKnown RBP13.41□□□□□ -0.26
DDX55-201ENST00000238146 GLIPR1P48060 266 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 RUNX1Q01196 453 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 ZNF100Q8IYN0 542 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 GPR61Q9BZJ8 451 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 SLC25A31Q9H0C2 315 aa13.41□□□□□ -0.26
DDX55-201ENST00000238146 TMEM50AO95807 157 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 GLB1P16278 677 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 HIST1H1BP16401 226 aaKnown RBP13.4□□□□□ -0.26
DDX55-201ENST00000238146 GNRHRP30968 328 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 DYNLT3P51808 116 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 LHFPL2Q6ZUX7 228 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 RABEPKQ7Z6M1 372 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 CLDND2Q8NHS1 167 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 TMEM56Q96MV1 263 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 TMEM56-RWDD3S4R434 201 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 NPIPA2E9PIF3 369 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 NPIPA3F8WFD2 350 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 RPL36A-HNRNPH2H7BZ11 118 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 SRPXP78539 464 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 PDZD11Q5EBL8 140 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 FAM27BQ5VT28 67 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 HIST3H2BBQ8N257 126 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 TMEM217Q8N7C4 229 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 ULBP2Q9BZM5 246 aa13.4□□□□□ -0.26
DDX55-201ENST00000238146 FOXD3Q9UJU5 478 aaPredicted RBP13.4□□□□□ -0.26
DDX55-201ENST00000238146 UBE2J1Q9Y385 318 aaPredicted RBP13.4□□□□□ -0.26
DDX55-201ENST00000238146 ZNF587BE7ETH6 402 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 PPP1R2P9O14990 202 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 PDCD6O75340 191 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 F10P00742 488 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 VAMP2P63027 116 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 EXT1Q16394 746 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 SLC35E3Q7Z769 313 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 ZNF695Q8IW36 515 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 GNPNAT1Q96EK6 184 aaPredicted RBP13.39□□□□□ -0.27
DDX55-201ENST00000238146 CHCHD2Q9Y6H1 151 aaPredicted RBP13.39□□□□□ -0.27
DDX55-201ENST00000238146 BCAT2O15382 392 aaPredicted RBP13.39□□□□□ -0.27
DDX55-201ENST00000238146 ADAM20O43506 726 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 NRASP01111 189 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 TCN2P20062 427 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 MALLQ13021 153 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 KHDC3LQ587J8 217 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 TMEM211Q6ICI0 200 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 WDR74Q6RFH5 385 aaPredicted RBP13.39□□□□□ -0.27
DDX55-201ENST00000238146 TBC1D26Q86UD7 250 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 SELENOHQ8IZQ5 122 aaKnown RBP13.39□□□□□ -0.27
DDX55-201ENST00000238146 ZIC4Q8N9L1 334 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 SPIN2AQ99865 258 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 SPIN2BQ9BPZ2 258 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 SLC7A10Q9NS82 523 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 ABCA7Q8IZY2 2146 aa13.39□□□□□ -0.27
DDX55-201ENST00000238146 SYNGR3O43761 229 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 LCATP04180 440 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 LTBRP36941 435 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 RPL23AP62750 156 aaKnown RBP13.38□□□□□ -0.27
DDX55-201ENST00000238146 MRPS34P82930 218 aaKnown RBP13.38□□□□□ -0.27
DDX55-201ENST00000238146 OR8B8Q15620 311 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 AKR1C8PQ5T2L2 129 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 TMEM42Q69YG0 159 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 ZNF774Q6NX45 483 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 P4HA3Q7Z4N8 544 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 MAML2Q8IZL2 1156 aaPredicted RBP13.38□□□□□ -0.27
DDX55-201ENST00000238146 FAM185AQ8N0U4 392 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 OR13D1Q8NGV5 346 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 ABHD5Q8WTS1 349 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 C14orf144Q96I85 54 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 RHOVQ96L33 236 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 ZNF442Q9H7R0 627 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 GFOD1Q9NXC2 390 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 P4HTMQ9NXG6 502 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 PTRH2Q9Y3E5 179 aaKnown RBP13.38□□□□□ -0.27
DDX55-201ENST00000238146 EML6Q6ZMW3 1958 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 CCDC163A0A0D9SF12 145 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 C2CD4DB7Z1M9 353 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 NKX6-1P78426 367 aaPredicted RBP13.38□□□□□ -0.27
DDX55-201ENST00000238146 DAZAP2Q15038 168 aaPredicted RBP13.38□□□□□ -0.27
DDX55-201ENST00000238146 RAB35Q15286 201 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 C5orf24Q7Z6I8 188 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 DPPA2Q7Z7J5 298 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 SLC25A45Q8N413 288 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 RBMXL1Q96E39 390 aaKnown RBP13.38□□□□□ -0.27
DDX55-201ENST00000238146 SIGLEC12Q96PQ1 595 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 GPHA2Q96T91 129 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 DEFB126Q9BYW3 111 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 CALHM2Q9HA72 323 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 IL36GQ9NZH8 169 aa13.38□□□□□ -0.27
DDX55-201ENST00000238146 SLC33A1O00400 549 aaPredicted RBP13.37□□□□□ -0.27
DDX55-201ENST00000238146 VAMP5O95183 116 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 CEACAM1P13688 526 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 HLA-DRB3P79483 266 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 OR2T2Q6IF00 324 aa13.37□□□□□ -0.27
DDX55-201ENST00000238146 CMTM1Q8IZ96 169 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms