RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 HIST1H2BKO60814 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 PPYP01298 95 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST1H2BJP06899 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 KLK3P07288 261 aaPredicted RBP10.7□□□□□ -0.7
NUP88-201ENST00000225696 SOD3P08294 240 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 JMJD7P0C870 316 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 CCL3P10147 92 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST1H2BOP23527 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST1H2BBP33778 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 PLA2G5P39877 138 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 DYNLT3P51808 116 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST1H2BDP58876 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST1H2BCP62807 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST2H2BEQ16778 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 ZNF674Q2M3X9 581 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.7□□□□□ -0.7
NUP88-201ENST00000225696 RAET1LQ5VY80 246 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 ZNF429Q86V71 674 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 CARFQ8N187 725 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 TMEM252Q8N6L7 170 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST1H2BHQ93079 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 SPSB1Q96BD6 273 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 BORCS8Q96FH0 119 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST1H2BNQ99877 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 HIST1H2BMQ99879 126 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 PROK2Q9HC23 129 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 SLC7A10Q9NS82 523 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 TMED3Q9Y3Q3 217 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 A0A0J9YW62 118 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 TRDCB7Z8K6 153 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 ZNF587BE7ETH6 402 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 C3orf80F5H4A9 247 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 ADAM20O43506 726 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 SLC34A2O95436 690 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 NRASP01111 189 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 B4GALT1P15291 398 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 NKX2-1P43699 371 aaPredicted RBP10.69□□□□□ -0.7
NUP88-201ENST00000225696 UBE2KP61086 200 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 ZNF92Q03936 586 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 ZNF385CQ66K41 422 aaPredicted RBP10.69□□□□□ -0.7
NUP88-201ENST00000225696 ASCL4Q6XD76 172 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 RABEPKQ7Z6M1 372 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 TBC1D26Q86UD7 250 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 OR14L1PQ8NHC6 308 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 RHOVQ96L33 236 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 TMEM222Q9H0R3 208 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 ZNF286AQ9HBT8 521 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 CRLF2Q9HC73 371 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 DMRT1Q9Y5R6 373 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 NBEAQ8NFP9 2946 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 IGKV1D-13A0A0B4J2D9 117 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 OR7C1O76099 320 aaPredicted RBP10.69□□□□□ -0.7
NUP88-201ENST00000225696 SCAF4O95104 1147 aaKnown RBP10.69□□□□□ -0.7
NUP88-201ENST00000225696 TRGC2P03986 189 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 IGKV1-13P0DP09 117 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 HAAOP46952 286 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 ZNF154Q13106 437 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 FAM27BQ5VT28 67 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 ZNF818PQ6ZRF7 136 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 SELENOHQ8IZQ5 122 aaKnown RBP10.69□□□□□ -0.7
NUP88-201ENST00000225696 LFNGQ8NES3 379 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 OR10D4PQ8NGN7 298 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 C10orf35Q96D05 121 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 PFDN5Q99471 154 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 SYT3Q9BQG1 590 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 GPR61Q9BZJ8 451 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 ZNF442Q9H7R0 627 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 CALHM2Q9HA72 323 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 CA14Q9ULX7 337 aa10.69□□□□□ -0.7
NUP88-201ENST00000225696 ZNF729A6NN14 1252 aaPredicted RBP10.68□□□□□ -0.7
NUP88-201ENST00000225696 CYB5BO43169 146 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 PITX3O75364 302 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 SPINK2P20155 84 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 GPX4P36969 197 aaPredicted RBP10.68□□□□□ -0.7
NUP88-201ENST00000225696 HERV-K104P61576 105 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 SPIN3Q5JUX0 258 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 UNQ6494/PRO21346Q6UXR6 183 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 KMT5CQ86Y97 462 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 MAML2Q8IZL2 1156 aaPredicted RBP10.68□□□□□ -0.7
NUP88-201ENST00000225696 C17orf78Q8N4C9 275 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 PLPPR1Q8TBJ4 325 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 SIGLEC12Q96PQ1 595 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 ALKBH3Q96Q83 286 aaPredicted RBP10.68□□□□□ -0.7
NUP88-201ENST00000225696 PRDM13Q9H4Q3 707 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 BCO1Q9HAY6 547 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 LYRM2Q9NU23 88 aaPredicted RBP10.68□□□□□ -0.7
NUP88-201ENST00000225696 IL36RNQ9UBH0 155 aa10.68□□□□□ -0.7
NUP88-201ENST00000225696 A0A1W2PQM1 296 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 TNFSF12O43508 249 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 PDCD6O75340 191 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 SCTP09683 121 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 ZNF32P17041 273 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 TCN2P20062 427 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 UCP3P55916 312 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 IZUMO4Q1ZYL8 232 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 TMEM42Q69YG0 159 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 ZNF100Q8IYN0 542 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 GAPTQ8N292 157 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 ZNF610Q8N9Z0 462 aa10.67□□□□□ -0.7
NUP88-201ENST00000225696 OR1F12Q8NHA8 337 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms