RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 BPIFB3P59826 476 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 GABARAPL2P60520 117 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 EMX1Q04741 257 aaPredicted RBP10.37□□□□□ -0.75
LSM5-201ENST00000223084 AESQ08117 197 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 SLC22A6Q4U2R8 563 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 GLIPR1L1Q6UWM5 242 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 ZNF782Q6ZMW2 699 aaPredicted RBP10.37□□□□□ -0.75
LSM5-201ENST00000223084 TMEM91Q6ZNR0 172 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 ZNF367Q7RTV3 350 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 LRRTM1Q86UE6 522 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 LYPD6Q86Y78 171 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 Q8NFD4 153 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 OR4D6Q8NGJ1 314 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 OR51T1Q8NGJ9 327 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 PPP1R35Q8TAP8 253 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 JMJD8Q96S16 334 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 S100A13Q99584 98 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 UNKLQ9H9P5 680 aaKnown RBP10.37□□□□□ -0.75
LSM5-201ENST00000223084 TCF7L1Q9HCS4 588 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 TNFRSF19Q9NS68 423 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 MRPS28Q9Y2Q9 187 aaKnown RBP10.37□□□□□ -0.75
LSM5-201ENST00000223084 SF3B6Q9Y3B4 125 aaKnown RBP10.37□□□□□ -0.75
LSM5-201ENST00000223084 TRAV24A0A0B4J272 114 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 A0A1W2PPH5 198 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 TRIM77I1YAP6 450 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 NPFFO15130 113 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 CSTBP04080 98 aaKnown RBP10.36□□□□□ -0.75
LSM5-201ENST00000223084 UCHL1P09936 223 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 ZNF728P0DKX0 622 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 COX7A1P24310 79 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 GLIPR1P48060 266 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 P2RX3P56373 397 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 UBA52P62987 128 aaKnown RBP10.36□□□□□ -0.75
LSM5-201ENST00000223084 FABP5Q01469 135 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 GUCA2AQ02747 115 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 IL13RA2Q14627 380 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 ATXN7L3Q14CW9 347 aaPredicted RBP10.36□□□□□ -0.75
LSM5-201ENST00000223084 SSX1Q16384 188 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 HSD17B12Q53GQ0 312 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 PAN3Q58A45 887 aaKnown RBP10.36□□□□□ -0.75
LSM5-201ENST00000223084 NCR3LG1Q68D85 454 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 AWAT2Q6E213 333 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 OSR2Q8N2R0 312 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 CHST4Q8NCG5 386 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 TBC1D15Q8TC07 691 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 C17orf50Q8WW18 174 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 THRSPQ92748 146 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 COQ2Q96H96 371 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 IL36GQ9NZH8 169 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 ST3GAL6Q9Y274 331 aa10.36□□□□□ -0.75
LSM5-201ENST00000223084 hADV38S2A0JD32 116 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 C17orf98A8MV24 154 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 GEMIN2O14893 280 aaKnown RBP10.35□□□□□ -0.75
LSM5-201ENST00000223084 HOXA3O43365 443 aaPredicted RBP10.35□□□□□ -0.75
LSM5-201ENST00000223084 SRMP19623 302 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 ERP29P30040 261 aaKnown RBP10.35□□□□□ -0.75
LSM5-201ENST00000223084 UBE2E1P51965 193 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 RBM11P57052 281 aaKnown RBP10.35□□□□□ -0.75
LSM5-201ENST00000223084 MEF2CQ06413 473 aaPredicted RBP10.35□□□□□ -0.75
LSM5-201ENST00000223084 SLC9A3R2Q15599 337 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 KRBOX4Q5JUW0 171 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 Q6YL49 198 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 TRAPPC6BQ86SZ2 158 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 SPARTQ8N0X7 666 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 NKAIN3Q8N8D7 197 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 TAF15Q92804 592 aaKnown RBP eCLIP10.35□□□□□ -0.75
LSM5-201ENST00000223084 ZNF714Q96N38 554 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 YTHDF1Q9BYJ9 559 aaKnown RBP10.35□□□□□ -0.75
LSM5-201ENST00000223084 PRDM13Q9H4Q3 707 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 BANF2Q9H503 90 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 LINC00312Q9Y6C7 94 aa10.35□□□□□ -0.75
LSM5-201ENST00000223084 MEIOCA2RUB1 952 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 MEGF11A6BM72 1044 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 MRPS14O60783 128 aaKnown RBP10.34□□□□□ -0.75
LSM5-201ENST00000223084 MMP23AO75900 390 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 OR7C1O76099 320 aaPredicted RBP10.34□□□□□ -0.75
LSM5-201ENST00000223084 MELTFP08582 738 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 SAA4P35542 130 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 TRAM1Q15629 374 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 TAF9Q16594 264 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 NHLRC3Q5JS37 347 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 BRICD5Q6PL45 260 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 CDH26Q8IXH8 852 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 SVOPQ8N4V2 548 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 TMEM104Q8NE00 496 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 PLPPR1Q8TBJ4 325 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 FAM216AQ8WUB2 273 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 ZFAND2BQ8WV99 257 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 PHYHIPQ92561 330 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 GFI1Q99684 422 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 UQCC2Q9BRT2 126 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 HEXA-AS1Q9H8Q6 139 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 FAM96BQ9Y3D0 163 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 LRRC42Q9Y546 428 aa10.34□□□□□ -0.75
LSM5-201ENST00000223084 TRGV10A0A0A0MS01 117 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 TRAV39A0A0B4J263 110 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 hCG_1809904A0A1W2PP81 198 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 A0A1W2PPE2 198 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 A0A1W2PR64 198 aa10.33□□□□□ -0.76
LSM5-201ENST00000223084 A0A1W2PRV1 198 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms