RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 IFITM10A6NMD0 228 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 H3BML4 177 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 EFNA2O43921 213 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 KLK3P07288 261 aaPredicted RBP13.81□□□□□ -0.2
SF3A2-201ENST00000221494 TAGLN2P37802 199 aaKnown RBP13.81□□□□□ -0.2
SF3A2-201ENST00000221494 GLIPR1P48060 266 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 FHITP49789 147 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 LBHQ53QV2 105 aaPredicted RBP13.81□□□□□ -0.2
SF3A2-201ENST00000221494 KHDC3LQ587J8 217 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 LYZL2Q7Z4W2 148 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 HSD17B11Q8NBQ5 300 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 OR5L2Q8NGL0 311 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 OR5D18Q8NGL1 313 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 OR2G3Q8NGZ4 309 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 POC1BQ8TC44 478 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 WDR77Q9BQA1 342 aaPredicted RBP13.81□□□□□ -0.2
SF3A2-201ENST00000221494 PIGQQ9BRB3 760 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 WDR54Q9H977 334 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 ZNF286AQ9HBT8 521 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 IL36GQ9NZH8 169 aa13.81□□□□□ -0.2
SF3A2-201ENST00000221494 TERTO14746 1132 aaKnown RBP13.8□□□□□ -0.2
SF3A2-201ENST00000221494 DIRAS3O95661 229 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 GPX4P36969 197 aaPredicted RBP13.8□□□□□ -0.2
SF3A2-201ENST00000221494 CSNK1A1P48729 337 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 PNRC1Q12796 327 aaPredicted RBP13.8□□□□□ -0.2
SF3A2-201ENST00000221494 MFAP5Q13361 173 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 RSU1Q15404 277 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 CNN3Q15417 329 aaKnown RBP13.8□□□□□ -0.2
SF3A2-201ENST00000221494 SLC22A25Q6T423 547 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 AKR7LQ8NHP1 331 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 M1APQ8TC57 530 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 RELTQ969Z4 430 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 CPNE4Q96A23 557 aaPredicted RBP13.8□□□□□ -0.2
SF3A2-201ENST00000221494 NIPSNAP3BQ9BS92 247 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 STRADBQ9C0K7 418 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 AK3Q9UIJ7 227 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 COL27A1Q8IZC6 1860 aaPredicted RBP13.8□□□□□ -0.2
SF3A2-201ENST00000221494 TRBV23-1A0A0A0MS06 115 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 PPP1R2P9O14990 202 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 C1QL1O75973 258 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 YIF1AO95070 293 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 PTBP3O95758 552 aaKnown RBP13.8□□□□□ -0.2
SF3A2-201ENST00000221494 CYC1P08574 325 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 GABRR1P24046 479 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 ATP6V0CP27449 155 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 RBP2P50120 134 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 NDUFA6P56556 154 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 RND3P61587 244 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 NHLH2Q02577 135 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 TLE4Q04727 773 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 OR8G1Q15617 311 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 DCAF12Q5T6F0 453 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 FAM69BQ5VUD6 431 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 CLEC2AQ6UVW9 174 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 PIP4P1Q86T03 277 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 LIME1Q9H400 295 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 ELL3Q9HB65 397 aaPredicted RBP13.8□□□□□ -0.2
SF3A2-201ENST00000221494 PIGLQ9Y2B2 252 aa13.8□□□□□ -0.2
SF3A2-201ENST00000221494 CLEC18AA5D8T8 446 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 XRCC2O43543 280 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 SCAF4O95104 1147 aaKnown RBP13.79□□□□□ -0.2
SF3A2-201ENST00000221494 FAHP16930 419 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 ZNF674Q2M3X9 581 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 ZNF429Q86V71 674 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 ZNF383Q8NA42 475 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 CLEC18CQ8NCF0 446 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 OR52M1Q8NGK5 317 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 Q8WTZ3 238 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 TMEM54Q969K7 222 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 TOMM40LQ969M1 308 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 SPTSSAQ969W0 71 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 SLAMF9Q96A28 289 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 LIN37Q96GY3 246 aaPredicted RBP13.79□□□□□ -0.2
SF3A2-201ENST00000221494 COL25A1Q9BXS0 654 aaPredicted RBP13.79□□□□□ -0.2
SF3A2-201ENST00000221494 LYRM2Q9NU23 88 aaPredicted RBP13.79□□□□□ -0.2
SF3A2-201ENST00000221494 FAM86C1Q9NVL1 165 aa13.79□□□□□ -0.2
SF3A2-201ENST00000221494 NXT1Q9UKK6 140 aaKnown RBP13.79□□□□□ -0.2
SF3A2-201ENST00000221494 A0A1W2PNU3 283 aaPredicted RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 TRDCB7Z8K6 153 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 MSTNO14793 375 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 KLF7O75840 302 aaPredicted RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HERV-K104P61576 105 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 PKIAP61925 76 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 RPP30P78346 268 aaKnown RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 NKX6-1P78426 367 aaPredicted RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 EXT1Q16394 746 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 SRSF7Q16629 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 Q6ZS49 121 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 LHFPL2Q6ZUX7 228 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 CPEB2Q7Z5Q1 589 aaKnown RBP13.78□□□□□ -0.2
SF3A2-201ENST00000221494 TMEM56Q96MV1 263 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 LRFN3Q9BTN0 628 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 PRDM13Q9H4Q3 707 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 KLRF1Q9NZS2 232 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 ZNF391Q9UJN7 358 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 TMEM56-RWDD3S4R434 201 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 RALGAPA1Q6GYQ0 2036 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 ZNF724A8MTY0 619 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 HIST1H2BKO60814 126 aa13.78□□□□□ -0.2
SF3A2-201ENST00000221494 MT-CO3P00414 261 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms