RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TMEM211Q6ICI0 200 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 SLC16A13Q7RTY0 426 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 C5orf24Q7Z6I8 188 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 CALHM1Q8IU99 346 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 SUMF1Q8NBK3 374 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 OR14L1PQ8NHC6 308 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 BOD1Q96IK1 185 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 FOXB1Q99853 325 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 PBDC1Q9BVG4 233 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 ZNF716A6NP11 495 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 UBE2CO00762 179 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 CXCL13O43927 109 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 ZNF14P17017 642 aaPredicted RBP14.9□□□□□ -0.02
USB1-201ENST00000219281 NPBWR2P48146 333 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 MLF1P58340 268 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 TCEAL6Q6IPX3 200 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 FAM24BQ8N5W8 94 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 TCEAL3Q969E4 200 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 SDK2Q58EX2 2172 aa14.9□□□□□ -0.02
USB1-201ENST00000219281 ZNF587BE7ETH6 402 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 LINC01387J3KSC0 135 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 K7N7A8 449 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 RAB5AP20339 215 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 FUT3P21217 361 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 SULT1A1P50225 295 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 ZNF100Q8IYN0 542 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 OR2C3Q8N628 320 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 TAAR9Q96RI9 348 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 RARRES2Q99969 163 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 GPR179Q6PRD1 2367 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 ZNF816-ZNF321PA0A0X1KG74 233 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 A0A1W2PPE2 198 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 TRDCB7Z8K6 153 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 DAZAP2Q15038 168 aaPredicted RBP14.89□□□□□ -0.03
USB1-201ENST00000219281 OR8B8Q15620 311 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 SLC25A26Q70HW3 274 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 GGNQ86UU5 652 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 ZNF611Q8N823 705 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 ZNF391Q9UJN7 358 aa14.89□□□□□ -0.03
USB1-201ENST00000219281 CNTRLQ7Z7A1 2325 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 IGSF23A1L1A6 192 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 C9J4A7 227 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 GPR37O15354 613 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 DNPH1O43598 174 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 ZNF806P0C7X5 589 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 EDN3P14138 238 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 OMGP23515 440 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 GNRHRP30968 328 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 POLR2GP62487 172 aaKnown RBP eCLIP14.88□□□□□ -0.03
USB1-201ENST00000219281 FABP9Q0Z7S8 132 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 SPIN3Q5JUX0 258 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 ABHD14AQ9BUJ0 271 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 TMEM222Q9H0R3 208 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 C11orf1Q9H5F2 150 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 SLC7A10Q9NS82 523 aa14.88□□□□□ -0.03
USB1-201ENST00000219281 UBE2J1Q9Y385 318 aaPredicted RBP14.88□□□□□ -0.03
USB1-201ENST00000219281 ITGA3P26006 1051 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 NKX2-1P43699 371 aaPredicted RBP14.87□□□□□ -0.03
USB1-201ENST00000219281 ADAM5Q6NVV9 412 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 DPPA2Q7Z7J5 298 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 TBC1D26Q86UD7 250 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 ZFP62Q8NB50 900 aaPredicted RBP14.87□□□□□ -0.03
USB1-201ENST00000219281 OR1J1Q8NGS3 322 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 OR2G3Q8NGZ4 309 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 S100A8P05109 93 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 S100A9P06702 114 aaKnown RBP14.87□□□□□ -0.03
USB1-201ENST00000219281 RFPL3SP0C7P2 107 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 SRD5A2P31213 254 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 CCL20P78556 96 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 RHEBQ15382 184 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 ZNF695Q8IW36 515 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 LILRB1Q8NHL6 650 aaPredicted RBP14.87□□□□□ -0.03
USB1-201ENST00000219281 MAGT1Q9H0U3 335 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 GPR35Q9HC97 309 aa14.87□□□□□ -0.03
USB1-201ENST00000219281 PUS1Q9Y606 427 aaKnown RBP eCLIP14.87□□□□□ -0.03
USB1-201ENST00000219281 ZNF724A8MTY0 619 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 ZNHIT1O43257 154 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 SSSCA1O60232 199 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 CDS2O95674 445 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 P04436 131 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 ATP6V0CP27449 155 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 PCBD1P61457 104 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 ZNF565Q8N9K5 539 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 LFNGQ8NES3 379 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 OR2Y1Q8NGV0 311 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 OR10D3Q8NH80 312 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 KCNE4Q8WWG9 221 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 EXTL1Q92935 676 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 GPHA2Q96T91 129 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 PLSCR2Q9NRY7 297 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 PARPBPQ9NWS1 579 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 SHANK1Q9Y566 2161 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 RPL36A-HNRNPH2H7BZ11 118 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 TRAPPC6AO75865 159 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 SMIM6P0DI80 62 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 PMELP40967 661 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 OR2B8PP59922 312 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 WIPI1Q5MNZ9 446 aaPredicted RBP14.86□□□□□ -0.03
USB1-201ENST00000219281 DBX2Q6ZNG2 339 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 SELENOHQ8IZQ5 122 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms