RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 OR8U8P0C7N1 319 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 AKR1C3P42330 323 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 RAP2BP61225 183 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 NHLH2Q02577 135 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 RIPPLY1Q0D2K3 151 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 ZNF529Q6P280 563 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 PDZD9Q8IXQ8 264 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 SPAG16Q8N0X2 631 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 FBXL14Q8N1E6 418 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 OR56B1Q8NGI3 324 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 OR1S1Q8NH92 325 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 C22orf15Q8WYQ4 148 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 SF3B5Q9BWJ5 86 aaKnown RBP8.62□□□□□ -1.03
USP11-201ENST00000218348 SNRPGP15A8MWD9 76 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 SFTPBP07988 381 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 GIPP09681 153 aaPredicted RBP8.62□□□□□ -1.03
USP11-201ENST00000218348 FOXC1Q12948 553 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 AIMP2Q13155 320 aaKnown RBP8.62□□□□□ -1.03
USP11-201ENST00000218348 ESPL1Q14674 2120 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 OR56B2PQ8NGI1 322 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 CPT1CQ8TCG5 803 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 GSKIPQ9P0R6 139 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 MCRIP1C9JLW8 97 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 TCF21O43680 179 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 HOXB5P09067 269 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 NPBWR2P48146 333 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 ATP1B3P54709 279 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 SLC10A1Q14973 349 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 CHRFAM7AQ494W8 412 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 SLC25A26Q70HW3 274 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 CALHM1Q8IU99 346 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 PRRT1Q99946 306 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 PECRQ9BY49 303 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 MFFQ9GZY8 342 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 PTTG3PQ9NZH4 202 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 IL36RNQ9UBH0 155 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 KIAA1549Q9HCM3 1950 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 GTF3C1Q12789 2109 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 HEATR1Q9H583 2144 aaKnown RBP8.61□□□□□ -1.03
USP11-201ENST00000218348 CA11O75493 328 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 OR7C1O76099 320 aaPredicted RBP8.61□□□□□ -1.03
USP11-201ENST00000218348 CRYGSP22914 178 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 THBS4P35443 961 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 NPBWR1P48145 328 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 OR2B8PP59922 312 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 SEC61A1P61619 476 aaKnown RBP8.61□□□□□ -1.03
USP11-201ENST00000218348 RAB1AP62820 205 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 RBX1P62877 108 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 RPS27AP62979 156 aaKnown RBP8.61□□□□□ -1.03
USP11-201ENST00000218348 PDZD11Q5EBL8 140 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 LY6G6FQ5SQ64 297 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 ABLIM2Q6H8Q1 611 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 DRAM2Q6UX65 266 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 HSD17B13Q7Z5P4 300 aaPredicted RBP8.61□□□□□ -1.03
USP11-201ENST00000218348 HAS2Q92819 552 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 APH1AQ96BI3 265 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 ZNF488Q96MN9 340 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 HS3ST6Q96QI5 342 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 GPHA2Q96T91 129 aa8.61□□□□□ -1.03
USP11-201ENST00000218348 SLC25A21Q9BQT8 299 aaPredicted RBP8.61□□□□□ -1.03
USP11-201ENST00000218348 KMT2BQ9UMN6 2715 aaPredicted RBP8.61□□□□□ -1.03
USP11-201ENST00000218348 IGKV1-12A0A0C4DH73 117 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 PLSCR5A0PG75 271 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 DHRS7CA6NNS2 312 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 CYB5R3P00387 301 aaPredicted RBP8.6□□□□□ -1.03
USP11-201ENST00000218348 IGKV1D-12P01611 117 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 CST2P09228 141 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 CPN1P15169 458 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 GPM6AP51674 278 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 FAM3AP98173 230 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 ZNF766Q5HY98 468 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 ZNF546Q86UE3 836 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 SPICQ8N5J4 248 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 FDCSPQ8NFU4 85 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 DMBX1Q8NFW5 382 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 OR51F2Q8NH61 342 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 NEK7Q8TDX7 302 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 TMPRSS5Q9H3S3 457 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 INTS1Q8N201 2190 aaKnown RBP8.6□□□□□ -1.03
USP11-201ENST00000218348 A0A0U1RQV5 110 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 LILRA1O75019 489 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 CHRM2P08172 466 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 SELEP16581 610 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 CCL1P22362 96 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 OTX1P32242 354 aaPredicted RBP8.6□□□□□ -1.03
USP11-201ENST00000218348 SOX8P57073 446 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 MRPS11P82912 194 aaKnown RBP8.6□□□□□ -1.03
USP11-201ENST00000218348 HOXA4Q00056 320 aaPredicted RBP8.6□□□□□ -1.03
USP11-201ENST00000218348 MEF2DQ14814 521 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 SP6Q3SY56 376 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 TMUB2Q71RG4 321 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 CNEP1R1Q8N9A8 125 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 UBAC2Q8NBM4 344 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 PPP1R1CQ8WVI7 109 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 FER1L6-AS2Q96M78 137 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 ZNF552Q9H707 407 aaPredicted RBP8.6□□□□□ -1.03
USP11-201ENST00000218348 NPTNQ9Y639 398 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 V9GYS6 101 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 RELNP78509 3460 aa8.6□□□□□ -1.03
USP11-201ENST00000218348 OR5H14A6NHG9 310 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms