RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 IGSF23A1L1A6 192 aa13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 SYNGR3O43761 229 aa13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 SSSCA1O60232 199 aa13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 GAPDHP04406 335 aaKnown RBP13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 ZNF883P0CG24 379 aa13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 EPHA1P21709 976 aa13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 EIF1P41567 113 aaKnown RBP13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 SUCLG1P53597 346 aaKnown RBP13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 ZNF239Q16600 458 aaKnown RBP13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 PLCXD3Q63HM9 321 aa13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 P4HA3Q7Z4N8 544 aa13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 LYPD6BQ8NI32 183 aa13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 ZNF845Q96IR2 970 aaPredicted RBP13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 PAPOLGQ9BWT3 736 aaKnown RBP13.66□□□□□ -0.22
SNAPC1-201ENST00000216294 COL27A1Q8IZC6 1860 aaPredicted RBP13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 H3BP45 60 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 CXCL13O43927 109 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 CRYGSP22914 178 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 SLC25A26Q70HW3 274 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 OSR2Q8N2R0 312 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 OR1F12Q8NHA8 337 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 M1APQ8TC57 530 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 TMEM171Q8WVE6 324 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 C18orf12Q96KH6 178 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 KPTNQ9Y664 436 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 RRP8O43159 456 aaKnown RBP13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 TCN2P20062 427 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 P2RY1P47900 373 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 SSR4P51571 173 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 ZNF133P52736 654 aaPredicted RBP13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 HIST1H3AP68431 136 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 HIST2H3PS2Q5TEC6 136 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 HIST2H3AQ71DI3 136 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 C15orf54Q8N8G6 183 aa13.65□□□□□ -0.22
SNAPC1-201ENST00000216294 A0A096LPE4 126 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 A0A1W2PPZ6 126 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 ZNF724A8MTY0 619 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 GPR137BO60478 399 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 TRAPPC6AO75865 159 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 YIF1AO95070 293 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 SCTP09683 121 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 RAB5AP20339 215 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 EWSR1Q01844 656 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 TLE1Q04724 770 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 HNF4GQ14541 408 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 CEACAM16Q2WEN9 425 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 CDPF1Q6NVV7 123 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 MED12LQ86YW9 2145 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 SKA3Q8IX90 412 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 ABHD3Q8WU67 409 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 RNF122Q9H9V4 155 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 GSN-AS1Q9NRJ2 163 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 SLC7A10Q9NS82 523 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 LUZP4Q9P127 313 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 HSD17B6O14756 317 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 FABP1P07148 127 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 OR8U8P0C7N1 319 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 PPA1Q15181 289 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 FAM189A2Q15884 450 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 FAM27BQ5VT28 67 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 PPP1R32Q7Z5V6 425 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 RPS19BP1Q86WX3 136 aaKnown RBP13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 ZNF565Q8N9K5 539 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 UBALD1Q8TB05 177 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 CT55Q8WUE5 264 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 GINS3Q9BRX5 216 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 PLEKHA2Q9HB19 425 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 DECR2Q9NUI1 292 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 TCFL5Q9UL49 500 aa13.64□□□□□ -0.23
SNAPC1-201ENST00000216294 IGKV1D-13A0A0B4J2D9 117 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 CDX4O14627 284 aaPredicted RBP13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 ST8SIA3O43173 380 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 TMEM50AO95807 157 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 IGKV1-13P0DP09 117 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 CD59P13987 128 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 FOXG1P55316 489 aaPredicted RBP13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 WIPI1Q5MNZ9 446 aaPredicted RBP13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 PLA2G2CQ5R387 149 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 OR14L1PQ8NHC6 308 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 OR51B6Q9H340 312 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 BORCS7-ASMTA0A0B4J1R7 106 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 H0YL77 283 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 H7C1Q1 480 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 CLN5O75503 358 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 EDN3P14138 238 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 ATP6V0CP27449 155 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 Q0VFX4 171 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 C6orf15Q6UXA7 325 aaPredicted RBP13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 C17orf78Q8N4C9 275 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 ZNF611Q8N823 705 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 OR2G3Q8NGZ4 309 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 ZNF488Q96MN9 340 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 KCNJ16Q9NPI9 418 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 GLRX2Q9NS18 164 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 SLC7A11Q9UPY5 501 aa13.63□□□□□ -0.23
SNAPC1-201ENST00000216294 TRAV39A0A0B4J263 110 aa13.62□□□□□ -0.23
SNAPC1-201ENST00000216294 IGHV3-64DA0A0J9YX35 117 aa13.62□□□□□ -0.23
SNAPC1-201ENST00000216294 A0A1W2PNU3 283 aaPredicted RBP13.62□□□□□ -0.23
SNAPC1-201ENST00000216294 PPYP01298 95 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms