RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HSD17B11Q8NBQ5 300 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 OR1J1Q8NGS3 322 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 OR11L1Q8NGX0 322 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 CACNA1EQ15878 2313 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 C1QL1O75973 258 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 CDS2O95674 445 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 GLI4P10075 376 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 IL11RAQ14626 422 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 SLC35G3Q8N808 338 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 TCTEX1D2Q8WW35 142 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 KCNJ16Q9NPI9 418 aa17.41■□□□□ 0.38
SYNGAP1-227ENST00000638142 hCG_38984A0A1B0GV85 526 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 OR8U8P0C7N1 319 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 AADACP22760 399 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 PRSS12P56730 875 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 TGIF1Q15583 401 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 FAM185AQ8N0U4 392 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 BOD1Q96IK1 185 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 TECTBQ96PL2 329 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 SMDT1Q9H4I9 107 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 TRAV20A0A0B4J274 112 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 hCG_1809904A0A1W2PP81 198 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 A0A1W2PR64 198 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 A0A1W2PRV1 198 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 K7N7A8 449 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 RBM11P57052 281 aaKnown RBP17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 EWSR1Q01844 656 aaKnown RBP eCLIP17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 AKR7LQ8NHP1 331 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 POM121Q96HA1 1249 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 MIOXQ9UGB7 285 aa17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 PTRH2Q9Y3E5 179 aaKnown RBP17.4■□□□□ 0.38
SYNGAP1-227ENST00000638142 AP4M1O00189 453 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 DAOP14920 347 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 B4GALT1P15291 398 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 FUT3P21217 361 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 MAS1LP35410 378 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 SULT1A1P50225 295 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 RAB1AP62820 205 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 SAP25Q8TEE9 199 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 TP53RKQ96S44 253 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 PLSCR2Q9NRY7 297 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 C3orf85A0A1B0GTC6 90 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 PPYP01298 95 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 KLK3P07288 261 aaPredicted RBP17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 EIF2S3P41091 472 aaKnown RBP17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 PSG4Q00888 419 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZNF266Q14584 549 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 RPS19BP1Q86WX3 136 aaKnown RBP17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 NAXEQ8NCW5 288 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 NAT6Q93015 286 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 C20orf24Q9BUV8 137 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 HS3ST3B1Q9Y662 390 aa17.39■□□□□ 0.37
SYNGAP1-227ENST00000638142 K7ESF4 209 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 MPPED1O15442 326 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 NTF4P34130 210 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 PLCXD3Q63HM9 321 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 MEX3BQ6ZN04 569 aaKnown RBP17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 TMEM182Q6ZP80 229 aaPredicted RBP17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 OR2C3Q8N628 320 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM213BQ8TBF2 198 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 C11orf1Q9H5F2 150 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZNF442Q9H7R0 627 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 FBXO7Q9Y3I1 522 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZNF816-ZNF321PA0A0X1KG74 233 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 CLN5O75503 358 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 B3GALT5-AS1P59052 145 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 PCBD1P61457 104 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZNF92Q03936 586 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 Q6ZPA2 131 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 C1QL4Q86Z23 238 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM24BQ8N5W8 94 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 KCNE4Q8WWG9 221 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 ALKBH3Q96Q83 286 aaPredicted RBP17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 FOXB1Q99853 325 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 OR2H1Q9GZK4 316 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 TMEM222Q9H0R3 208 aa17.38■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZNF716A6NP11 495 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 TRDCB7Z8K6 153 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 IGHV2-70P01814 119 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 PATE4P0C8F1 98 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 NQO2P16083 231 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 MLF1P58340 268 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 CLINT1Q14677 625 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 AAED1Q7RTV5 226 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 CD300LFQ8TDQ1 290 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 MR1Q95460 341 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 SPIN2AQ99865 258 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 SPIN2BQ9BPZ2 258 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 WNT5BQ9H1J7 359 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 TINAGQ9UJW2 476 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 TRIOBPQ9H2D6 2365 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 GDF9O60383 454 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 KLF7O75840 302 aaPredicted RBP17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 SRD5A2P31213 254 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 PPP1CCP36873 323 aaKnown RBP17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 CXCL12P48061 93 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 CARD18P57730 90 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 ADAM5Q6NVV9 412 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 TMPRSS5Q9H3S3 457 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms