RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 OR8B3Q8NGG8 313 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 LGALS14Q8TCE9 139 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 SEH1LQ96EE3 360 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 NEIL1Q96FI4 390 aaPredicted RBP8.22□□□□□ -1.09
CLN3-261ENST00000637686 FAHD2AQ96GK7 314 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 OR8B2Q96RD0 313 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 TM2D1Q9BX74 207 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 METTL9Q9H1A3 318 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 SEBOXQ9HB31 216 aaPredicted RBP8.22□□□□□ -1.09
CLN3-261ENST00000637686 HMG20AQ9NP66 347 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 MMP26Q9NRE1 261 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 RHBDL2Q9NX52 303 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 COMMD3Q9UBI1 195 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 LPAR3Q9UBY5 353 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 ARHGAP32A7KAX9 2087 aa8.22□□□□□ -1.09
CLN3-261ENST00000637686 NF1P21359 2839 aa8.21□□□□□ -1.09
CLN3-261ENST00000637686 SVEP1Q4LDE5 3571 aa8.21□□□□□ -1.09
CLN3-261ENST00000637686 TMEM272A0A1B0GTI8 110 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 SMIM30A4D0T7 59 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 METTL21EPA6NDL7 271 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 KIAA1324LA8MWY0 1029 aaPredicted RBP8.21□□□□□ -1.1
CLN3-261ENST00000637686 TRAPPC2LH3BP13 241 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.21□□□□□ -1.1
CLN3-261ENST00000637686 CTDSP2O14595 271 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 RGS5O15539 181 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 PAHP00439 452 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 VSIG8P0DPA2 414 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.1
CLN3-261ENST00000637686 HNF1AP20823 631 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 CPT2P23786 658 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 TNFSF8P32971 234 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 TALDO1P37837 337 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 HAAOP46952 286 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 OR3A4PP47883 348 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 GNB2P62879 340 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 ARL6IP1Q15041 203 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 MICBQ29980 383 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 SPANXN2Q5MJ10 180 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 DCAF12L2Q5VW00 463 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 TEX36Q5VZQ5 186 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 HAGHLQ6PII5 290 aaPredicted RBP8.21□□□□□ -1.1
CLN3-261ENST00000637686 ZNF841Q6ZN19 808 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 NLRC3Q7RTR2 1065 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 CALHM1Q8IU99 346 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 FAM89BQ8N5H3 189 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 SAMD12Q8N8I0 201 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 OR51D1Q8NGF3 324 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 OR51T1Q8NGJ9 327 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 OR5H6Q8NGV6 325 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 NPRL2Q8WTW4 380 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 AQP3Q92482 292 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 SLC25A38Q96DW6 304 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 S100A16Q96FQ6 103 aaKnown RBP8.21□□□□□ -1.1
CLN3-261ENST00000637686 CEP19Q96LK0 163 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 SOSTQ9BQB4 213 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 URM1Q9BTM9 101 aaKnown RBP8.21□□□□□ -1.1
CLN3-261ENST00000637686 SSBP3Q9BWW4 388 aaPredicted RBP8.21□□□□□ -1.1
CLN3-261ENST00000637686 WDR12Q9GZL7 423 aaKnown RBP8.21□□□□□ -1.1
CLN3-261ENST00000637686 WDR13Q9H1Z4 485 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 MIXL1Q9H2W2 232 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 AKIP1Q9NQ31 210 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 CTSZQ9UBR2 303 aa8.21□□□□□ -1.1
CLN3-261ENST00000637686 A0A0G2JMP0 313 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 A0A0X1KG70 313 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 A8MXK9 166 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 SRRM5B3KS81 715 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 ADAM20O43506 726 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 NDUFA2O43678 99 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 SYNGR1O43759 233 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 AVPP01185 164 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 CSTBP04080 98 aaKnown RBP8.2□□□□□ -1.1
CLN3-261ENST00000637686 PGA5P0DJD9 388 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 TMEM225BP0DP42 221 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 GTF2F2P13984 249 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 MUC1P15941 1255 aaPredicted RBP8.2□□□□□ -1.1
CLN3-261ENST00000637686 GLRA1P23415 457 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 CD40LGP29965 261 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 PITPNBP48739 271 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 CLDN12P56749 244 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 FGF12P61328 243 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 ERVK11-1P61568 191 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 RPS27AP62979 156 aaKnown RBP8.2□□□□□ -1.1
CLN3-261ENST00000637686 MRPS10P82664 201 aaKnown RBP8.2□□□□□ -1.1
CLN3-261ENST00000637686 UNC119Q13432 240 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 IL13RA2Q14627 380 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 P2RY14Q15391 338 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 RSU1Q15404 277 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 WDR25Q64LD2 544 aaPredicted RBP8.2□□□□□ -1.1
CLN3-261ENST00000637686 C1orf229Q6ZS94 237 aaPredicted RBP8.2□□□□□ -1.1
CLN3-261ENST00000637686 SLC25A26Q70HW3 274 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 LAX1Q8IWV1 398 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 POC1AQ8NBT0 407 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 OR4M2Q8NGB6 313 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 OR5T2Q8NGG2 359 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 SPACA5Q96QH8 159 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 CCL13Q99616 98 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 TMEM59Q9BXS4 323 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 TMPRSS13Q9BYE2 586 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 IFT22Q9H7X7 185 aa8.2□□□□□ -1.1
CLN3-261ENST00000637686 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms