RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 EPHA1P21709 976 aa13□□□□□ -0.33
THUMPD1-206ENST00000636554 LSM6P62312 80 aaKnown RBP13□□□□□ -0.33
THUMPD1-206ENST00000636554 RBM24Q9BX46 236 aaKnown RBP13□□□□□ -0.33
THUMPD1-206ENST00000636554 PRDM13Q9H4Q3 707 aa13□□□□□ -0.33
THUMPD1-206ENST00000636554 GLRX2Q9NS18 164 aa13□□□□□ -0.33
THUMPD1-206ENST00000636554 IGHV1OR15-9A0A0B4J2B8 117 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 SOD3P08294 240 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 AADACP22760 399 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 DTYMKP23919 212 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 GUCA1AP43080 201 aaPredicted RBP12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 RGS19P49795 217 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 PLXDC1Q8IUK5 500 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 TMEM217Q8N7C4 229 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 OR14L1PQ8NHC6 308 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 C11orf1Q9H5F2 150 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 SLC7A11Q9UPY5 501 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 CYB5BO43169 146 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 DUX1O43812 170 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 CST7O76096 145 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 OTX1P32242 354 aaPredicted RBP12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 DEFA6Q01524 100 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 ICAM4Q14773 271 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 P4HA3Q7Z4N8 544 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 ZNF429Q86V71 674 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 MOB3AQ96BX8 217 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 INTS12Q96CB8 462 aaKnown RBP12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 GPR61Q9BZJ8 451 aa12.99□□□□□ -0.33
THUMPD1-206ENST00000636554 TRGC2P03986 189 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 CD63P08962 238 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 MSX1P28360 303 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 ZNF266Q14584 549 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 OR5C1Q8NGR4 320 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 UCN2Q96RP3 112 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 PARPBPQ9NWS1 579 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 KIAA1456Q9P272 454 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 MYOTQ9UBF9 498 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 SHHQ15465 462 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 ODF3L1Q8IXM7 274 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 TMED3Q9Y3Q3 217 aa12.98□□□□□ -0.33
THUMPD1-206ENST00000636554 SDK2Q58EX2 2172 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 PROB1E7EW31 1015 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 TLX3O43711 291 aaPredicted RBP12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 PITX3O75364 302 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 SCAF4O95104 1147 aaKnown RBP12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 CXorf66Q5JRM2 361 aaPredicted RBP12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 UNQ6494/PRO21346Q6UXR6 183 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 ANGPTL4Q9BY76 406 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 WSB1Q9Y6I7 421 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 IGLV3-32A0A0A0MS00 114 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 C3orf85A0A1B0GTC6 90 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 CXorf65A6NEN9 183 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 EN2P19622 333 aaPredicted RBP12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 NKX2-1P43699 371 aaPredicted RBP12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 KHDC3LQ587J8 217 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 TMEM252Q8N6L7 170 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 SYT3Q9BQG1 590 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 ZNF286AQ9HBT8 521 aa12.97□□□□□ -0.33
THUMPD1-206ENST00000636554 TMEM50AO95807 157 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 PPYP01298 95 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 CD27P26842 260 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 DYNLT3P51808 116 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 HERV-K104P61576 105 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 HNRNPKP61978 463 aaKnown RBP eCLIP12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 SHBQ15464 509 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 Q6ZSR3 168 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 TGIF2Q9GZN2 237 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 SMDT1Q9H4I9 107 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 OPA3Q9H6K4 179 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 ST3GAL6Q9Y274 331 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 MTCH2Q9Y6C9 303 aa12.96□□□□□ -0.33
THUMPD1-206ENST00000636554 GAMTQ14353 236 aa12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 C10orf128Q5T292 105 aa12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 FBXO46Q6PJ61 603 aaPredicted RBP12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 HIST3H2BBQ8N257 126 aa12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 NAT6Q93015 286 aa12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 SPSB1Q96BD6 273 aa12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 S100PBPQ96BU1 408 aa12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 BORCS8Q96FH0 119 aa12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 C14orf144Q96I85 54 aa12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 LYRM2Q9NU23 88 aaPredicted RBP12.96□□□□□ -0.34
THUMPD1-206ENST00000636554 A0A087WWC5 75 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 TRDCB7Z8K6 153 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 TERTO14746 1132 aaKnown RBP12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 MPPED1O15442 326 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 DHHO43323 396 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 ADAM20O43506 726 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 HIST1H3AP68431 136 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 NKAIN1Q4KMZ8 207 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 HIST2H3PS2Q5TEC6 136 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 RHBDD2Q6NTF9 364 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 TSTD1Q8NFU3 115 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 TMEM54Q969K7 222 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 SPTSSAQ969W0 71 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 NIPSNAP3BQ9BS92 247 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 UNKLQ9H9P5 680 aaKnown RBP12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 FOXD3Q9UJU5 478 aaPredicted RBP12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 FREM2Q5SZK8 3169 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 ZNF587BE7ETH6 402 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 PPP1R2P9O14990 202 aa12.95□□□□□ -0.34
THUMPD1-206ENST00000636554 JMJD7P0C870 316 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms