RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 CHST6Q9GZX3 395 aa10.01□□□□□ -0.81
SOX2-OT-247ENST00000628347 COMMD4Q9H0A8 199 aa10.01□□□□□ -0.81
SOX2-OT-247ENST00000628347 FRRS1LQ9P0K9 344 aa10.01□□□□□ -0.81
SOX2-OT-247ENST00000628347 FUOMA2VDF0 154 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 H3BUI4 141 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 SLC16A6O15403 523 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 MMP23AO75900 390 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 KDM4BO94953 1096 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 ALPLP05186 524 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 HTR1AP08908 422 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 ZNF20P17024 532 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 HTR1DP28221 377 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 DUSP1P28562 367 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 CD34P28906 385 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 VDAC2P45880 294 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-247ENST00000628347 NANOS3P60323 173 aaKnown RBP10□□□□□ -0.81
SOX2-OT-247ENST00000628347 SLC34A1Q06495 639 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 NSUN5P1Q3KNT7 163 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 MEDAGQ5VYS4 303 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 HEPN1Q6WQI6 88 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 SAXO1Q8IYX7 474 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 OR4F17Q8NGA8 305 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 RNFT2Q96EX2 444 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 OPALINQ96PE5 141 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 OR4F4Q96R69 305 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 CITED2Q99967 270 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-247ENST00000628347 OCSTAMPQ9BR26 566 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 MMP28Q9H239 520 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 GAL3ST2Q9H3Q3 398 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 EXOSC4Q9NPD3 245 aaKnown RBP10□□□□□ -0.81
SOX2-OT-247ENST00000628347 IMPAD1Q9NX62 359 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 TAS2R3Q9NYW6 316 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 DPM3Q9P2X0 92 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 HHLA2Q9UM44 414 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 EXOGQ9Y2C4 368 aaKnown RBP10□□□□□ -0.81
SOX2-OT-247ENST00000628347 HILPDAQ9Y5L2 63 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 KIAA2026Q5HYC2 2103 aa10□□□□□ -0.81
SOX2-OT-247ENST00000628347 TRGV10A0A0A0MS01 117 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 IGKV1-12A0A0C4DH73 117 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 DAPL1A0PJW8 107 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 SAC3D1A6NKF1 404 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 SH2D1BO14796 132 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 ALX3O95076 343 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 OR2H2O95918 312 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 IGKV1D-12P01611 117 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 CSN2P05814 226 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 JUNBP17275 347 aaPredicted RBP9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 BLCAPP62952 87 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 BDH1Q02338 343 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 Q6ZS46 218 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 TRAPPC6BQ86SZ2 158 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 LYG1Q8N1E2 194 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 ZNF596Q8TC21 504 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 LIN7BQ9HAP6 207 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 NEK6Q9HC98 313 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 GSTK1Q9Y2Q3 226 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 PCDHGB5Q9Y5G0 923 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 DNAH9Q9NYC9 4486 aa9.99□□□□□ -0.81
SOX2-OT-247ENST00000628347 OR4C45A6NMZ5 311 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 SIRPB1O00241 398 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 PEX14O75381 377 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 CIB2O75838 187 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 IGLV1-47P01700 117 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 RPSAP08865 295 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 CD83Q01151 205 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 ALKBH1Q13686 389 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 Q6P435 159 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 Q6ZPA2 131 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 ABHD12Q8N2K0 398 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 ACBD7Q8N6N7 88 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 CHST4Q8NCG5 386 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 OR51A4Q8NGJ6 313 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 OR10AC1Q8NH08 325 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 R3HDM4Q96D70 268 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 PELI1Q96FA3 418 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 MRPL48Q96GC5 212 aaKnown RBP9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 AKR1E2Q96JD6 320 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 MYCBPQ99417 103 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 ORC6Q9Y5N6 252 aa9.98□□□□□ -0.81
SOX2-OT-247ENST00000628347 A0A087X0M5 115 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 A0A1B0GX30 115 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 ODAMA1E959 279 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 SNTNA6NMZ2 147 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 LEUTXA8MZ59 168 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 OCM2P0CE71 109 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 OCMP0CE72 109 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 CALCBP10092 127 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 CDK2P24941 298 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 BRS3P32247 399 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 GLIPR1P48060 266 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 ALDH3A2P51648 485 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 ARHGDIBP52566 201 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 SNU13P55769 128 aaKnown RBP9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 TMEM95Q3KNT9 176 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 ARSJQ5FYB0 599 aaPredicted RBP9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 PRAMEF5Q5TYX0 476 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 BAIAP2L2Q6UXY1 529 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 RNF144BQ7Z419 303 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 SYS1Q8N2H4 156 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms