RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 MICBQ29980 383 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 ZNF880Q6PDB4 577 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 BHLHA9Q7RTU4 235 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 C6orf201Q7Z4U5 140 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 RHBDD1Q8TEB9 315 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 SMIM12Q96EX1 92 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 CXCL12P48061 93 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 C12orf54Q6X4T0 127 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 Q8IYB0 196 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 POM121L2Q96KW2 1035 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 IP6K3Q96PC2 410 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 TMEM204Q9BSN7 226 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 WASHC3Q9Y3C0 194 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 COL11A1P12107 1806 aaPredicted RBP7.91□□□□□ -1.14
VCL-206ENST00000623461 COL16A1Q07092 1604 aaPredicted RBP7.91□□□□□ -1.14
VCL-206ENST00000623461 PLXNB2O15031 1838 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 SYNGR2O43760 224 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 RCC1P18754 421 aaPredicted RBP7.91□□□□□ -1.14
VCL-206ENST00000623461 CCR2P41597 374 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 SERF2P84101 59 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 ZNF816Q0VGE8 651 aaPredicted RBP7.91□□□□□ -1.14
VCL-206ENST00000623461 OBP2AQ9NY56 170 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 ZMIZ1Q9ULJ6 1067 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 PRRC2BQ5JSZ5 2229 aaKnown RBP7.91□□□□□ -1.14
VCL-206ENST00000623461 SIGLEC5O15389 551 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 CHST1O43916 411 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 CD8AP01732 235 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 MT-ND6P03923 174 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 SIGLEC14Q08ET2 396 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 EDDM3AQ14507 147 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 SPATA45Q537H7 98 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 TMEM215Q68D42 235 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 VN1R2Q8NFZ6 395 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 OR5D13Q8NGL4 314 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 DPF1Q92782 380 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 GINS3Q9BRX5 216 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 SH2D2AQ9NP31 389 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 DHCR7Q9UBM7 475 aaKnown RBP7.91□□□□□ -1.14
VCL-206ENST00000623461 CTXND1A0A1B0GTU2 59 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 GLB1P16278 677 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 LIMS1P48059 325 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 ZNF77Q15935 545 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 FGF13Q92913 245 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 IER2Q9BTL4 223 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 SH2D7A6NKC9 451 aaPredicted RBP7.91□□□□□ -1.14
VCL-206ENST00000623461 BMI1P35226 326 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 ZNF124Q15973 351 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 PRICKLE4Q2TBC4 344 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 TBC1D26Q86UD7 250 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 OR2A5Q96R48 311 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 HSF4Q9ULV5 492 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 ZNF835Q9Y2P0 537 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 C17orf78Q8N4C9 275 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 CYB561D1Q8N8Q1 229 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 KLK13Q9UKR3 277 aa7.91□□□□□ -1.14
VCL-206ENST00000623461 A0A0B4J293 547 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 HTR1DP28221 377 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 DCAF12Q5T6F0 453 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 DHRS13Q6UX07 377 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 HOGA1Q86XE5 327 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 OR10G3Q8NGC4 313 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 ABHD14BQ96IU4 210 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 MS4A4AQ96JQ5 239 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 MFRPQ9BY79 579 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 KCNK15Q9H427 330 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 TUBA4BQ9H853 241 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 TMEM265A0A087WTH1 108 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 A0A1B0GU03 582 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 DEFA4P12838 97 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 KIR2DS2P43631 304 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 LPAR6P43657 344 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 YBX1P67809 324 aaKnown RBP7.9□□□□□ -1.14
VCL-206ENST00000623461 MRPL30Q8TCC3 161 aaKnown RBP7.9□□□□□ -1.14
VCL-206ENST00000623461 ASB5Q8WWX0 329 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 FGF22Q9HCT0 170 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 ICAM5Q9UMF0 924 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 SIRT4Q9Y6E7 314 aaPredicted RBP7.9□□□□□ -1.14
VCL-206ENST00000623461 LRRC30A6NM36 301 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 BCAT2O15382 392 aaPredicted RBP7.9□□□□□ -1.14
VCL-206ENST00000623461 RHBDL1O75783 438 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 APCSP02743 223 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 BCL3P20749 454 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 GLIPR1P48060 266 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 LURAP1LQ8IV03 231 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 BATF2Q8N1L9 274 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 ASB16Q96NS5 453 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 COMMD5Q9GZQ3 224 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 UBE2ZQ9H832 354 aaPredicted RBP7.9□□□□□ -1.14
VCL-206ENST00000623461 TIMM9Q9Y5J7 89 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 TRAV8-7A0A075B6U6 113 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 TMEM30CPA0ZSE6 113 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 OR2M5A3KFT3 312 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 GAGE10A6NGK3 116 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 SNURFLB1AK76 121 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 FAM78AQ5JUQ0 283 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 TMEM183AQ8IXX5 376 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 BLNKQ8WV28 456 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 GPR61Q9BZJ8 451 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 WDR13Q9H1Z4 485 aa7.9□□□□□ -1.14
VCL-206ENST00000623461 LRRC37AA6NMS7 1700 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms