RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 NPTNQ9Y639 398 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 A0A1W2PNV4 684 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 IRF2P14316 349 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 CALCRP30988 508 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 WDSUB1Q8N9V3 476 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 SAP25Q8TEE9 199 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 TRIB1Q96RU8 372 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 NIT2Q9NQR4 276 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 FAM74A7A6NL05 159 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 H7C1Q1 480 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 IGHMP01871 453 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 RPS16P62249 146 aaKnown RBP11.21□□□□□ -0.61
MSH6-215ENST00000622629 S100A12P80511 92 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 GUCA2BQ16661 112 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 FAM74A3Q4VXF1 159 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 STPG1Q5TH74 334 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 PMS2CLQ68D20 193 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 FAM131CQ96AQ9 280 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 C12orf57Q99622 126 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 GPR35Q9HC97 309 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 A0A0U1RQV5 110 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 SH2D1BO14796 132 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 PPYP01298 95 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 CST2P09228 141 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 DAOP14920 347 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 P2RY4P51582 365 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 MLF1P58340 268 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 PSG4Q00888 419 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 ADIRFQ15847 76 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 PLAC9Q5JTB6 97 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 OR2A2Q6IF42 318 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 SSX9Q7RTT3 188 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 OR11L1Q8NGX0 322 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 MRPS24Q96EL2 167 aaKnown RBP11.21□□□□□ -0.61
MSH6-215ENST00000622629 B3GAT1Q9P2W7 334 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 HTTP42858 3142 aa11.21□□□□□ -0.61
MSH6-215ENST00000622629 TTLL8A6PVC2 850 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 MAGEA5P43359 124 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 DVL1P1P54792 670 aaPredicted RBP11.21□□□□□ -0.62
MSH6-215ENST00000622629 ZNF92Q03936 586 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 LIAT1Q6ZQX7 453 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 FAM185AQ8N0U4 392 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 GCM1Q9NP62 436 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 GPR37O15354 613 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 HPP00738 406 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 KRASP01116 189 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 OR1J1Q8NGS3 322 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 ISOC2Q96AB3 205 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 SAT2Q96F10 170 aaPredicted RBP11.21□□□□□ -0.62
MSH6-215ENST00000622629 HEXA-AS1Q9H8Q6 139 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 HEYLQ9NQ87 328 aaPredicted RBP11.21□□□□□ -0.62
MSH6-215ENST00000622629 PRELID3BQ9Y3B1 194 aa11.21□□□□□ -0.62
MSH6-215ENST00000622629 ACACAQ13085 2346 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 DHRS7CA6NNS2 312 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 ABCD4O14678 606 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 PTGER4P35408 488 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 ZNF273Q14593 569 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 FAM58AQ8N1B3 248 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 POC1BQ8TC44 478 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 MUCL1Q96DR8 90 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 TECTBQ96PL2 329 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 SLC26A1Q9H2B4 701 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 RIMS4Q9H426 269 aaPredicted RBP11.2□□□□□ -0.62
MSH6-215ENST00000622629 MMP24Q9Y5R2 645 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 IGHV1-45A0A0A0MS14 117 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 CDRT15L2A8MXV6 281 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 MPGP29372 298 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 RAB5CP51148 216 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 TLE1Q04724 770 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 OVCH2Q7RTZ1 564 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 GPHA2Q96T91 129 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 ANGPTL4Q9BY76 406 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 TRGV5A0A0B4J1U4 118 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 STARD6P59095 220 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 SPEM2Q0P670 501 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 PCOLCEQ15113 449 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 RBMS3Q6XE24 437 aaKnown RBP11.2□□□□□ -0.62
MSH6-215ENST00000622629 LHX4Q969G2 390 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 CLDN23Q96B33 292 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 MED9Q9NWA0 146 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 PSENENQ9NZ42 101 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 CLDN16Q9Y5I7 305 aa11.2□□□□□ -0.62
MSH6-215ENST00000622629 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
MSH6-215ENST00000622629 IGFBP3P17936 291 aaPredicted RBP11.19□□□□□ -0.62
MSH6-215ENST00000622629 TBC1D26Q86UD7 250 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 FAM24BQ8N5W8 94 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 RFESDQ8TAC1 157 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 C10orf35Q96D05 121 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 TCEAL7Q9BRU2 100 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 ZPBPQ9BS86 351 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 A0A1B0GTI1 187 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 MPPED1O15442 326 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 FCGR3AP08637 254 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 PRF1P14222 555 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 MEOX1P50221 254 aa11.19□□□□□ -0.62
MSH6-215ENST00000622629 DHODHQ02127 395 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms