RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 IGFL2Q6UWQ7 119 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 FTMTQ8N4E7 242 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 CITED4Q96RK1 184 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 SCP2D1Q9UJQ7 156 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 KCNS2Q9ULS6 477 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 IGHV2OR16-5A0A0B4J2B6 119 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 A1L4Q6 167 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 SS18L1O75177 396 aaPredicted RBP8.97□□□□□ -0.97
VPS11-208ENST00000621676 RGS11O94810 467 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 OR5H8P0DN80 308 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 FSTP19883 344 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 HACD4Q5VWC8 232 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 RGS7BPQ6MZT1 257 aaPredicted RBP8.97□□□□□ -0.97
VPS11-208ENST00000621676 NTNG2Q96CW9 530 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 WFIKKN1Q96NZ8 548 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 DPCDQ9BVM2 203 aaPredicted RBP8.97□□□□□ -0.97
VPS11-208ENST00000621676 LIME1Q9H400 295 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 TMEM100Q9NV29 134 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 TRAPPC2LQ9UL33 140 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 DEGS1O15121 323 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 MLNRO43193 412 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 EPHA1P21709 976 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 ACTBP60709 375 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 ACTG1P63261 375 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 HIST1H3AP68431 136 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 QRFPP83859 136 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 BSPH1Q075Z2 132 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 ATPAF1Q5TC12 328 aaPredicted RBP8.97□□□□□ -0.97
VPS11-208ENST00000621676 HIST2H3PS2Q5TEC6 136 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 BAIAP2L2Q6UXY1 529 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 Q6ZR03 302 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 HIST2H3AQ71DI3 136 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 OR8H1Q8NGG4 311 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 OR13C8Q8NGS7 320 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 RND1Q92730 232 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 JMJD1CQ15652 2540 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 CREBL2O60519 120 aaPredicted RBP8.97□□□□□ -0.97
VPS11-208ENST00000621676 CSF1P09603 554 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 OR4E1P0C645 316 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 PRKACBP22694 351 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 DNASE1P24855 282 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 NAAAQ02083 359 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 OR8B8Q15620 311 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 C6orf183Q5T699 404 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 FAM57AQ8TBR7 257 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 MRGPRDQ8TDS7 321 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 ZNF431Q8TF32 576 aaPredicted RBP8.97□□□□□ -0.97
VPS11-208ENST00000621676 KIRREL1Q96J84 757 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 OR2V2Q96R30 315 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 UQCC2Q9BRT2 126 aa8.97□□□□□ -0.97
VPS11-208ENST00000621676 OR5H14A6NHG9 310 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 ZSCAN5BA6NJL1 495 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 A8MXE2 369 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 MAB21L1Q13394 359 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 RBMS2Q15434 407 aaKnown RBP8.96□□□□□ -0.97
VPS11-208ENST00000621676 BEND4Q6ZU67 534 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 TMEM200AQ86VY9 491 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 ZSCAN4Q8NAM6 433 aaPredicted RBP8.96□□□□□ -0.97
VPS11-208ENST00000621676 RELL2Q8NC24 303 aaPredicted RBP8.96□□□□□ -0.97
VPS11-208ENST00000621676 OR6K3Q8NGY3 331 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 LRRC29Q8WV35 223 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 ITLN1Q8WWA0 313 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 SMIM3Q9BZL3 60 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 ZC4H2Q9NQZ6 224 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 RDH8Q9NYR8 311 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 ZNRD1Q9P1U0 126 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 PPP1R3CQ9UQK1 317 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 NUBP2Q9Y5Y2 271 aa8.96□□□□□ -0.97
VPS11-208ENST00000621676 MEIKINA0A087WXM9 373 aa8.96□□□□□ -0.98
VPS11-208ENST00000621676 A0A1B0GV50 99 aa8.96□□□□□ -0.98
VPS11-208ENST00000621676 ICMTO60725 284 aa8.96□□□□□ -0.98
VPS11-208ENST00000621676 CEACAM4O75871 244 aa8.96□□□□□ -0.98
VPS11-208ENST00000621676 GABRA1P14867 456 aa8.96□□□□□ -0.98
VPS11-208ENST00000621676 ZP1P60852 638 aa8.96□□□□□ -0.98
VPS11-208ENST00000621676 RPUSD3Q6P087 351 aaKnown RBP8.96□□□□□ -0.98
VPS11-208ENST00000621676 A0A1W2PRD5 423 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 A0A1W2PRF3 423 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 A0A1W2PRM7 423 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 HMX3A6NHT5 357 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 C16orf97H3BN30 126 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 DIRAS3O95661 229 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 ECDO95905 644 aaPredicted RBP8.95□□□□□ -0.98
VPS11-208ENST00000621676 CD1AP06126 327 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 OR8U9P0C7N5 309 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 NFYBP25208 207 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 GLP1RP43220 463 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 H2BFSP57053 126 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 GNG3P63215 75 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 DHRS2Q13268 280 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 ZNF718Q3SXZ3 478 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 OR2A2Q6IF42 318 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 LINC00299Q6ZSB3 139 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 FAM58AQ8N1B3 248 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 DUSP18Q8NEJ0 188 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 OR8U1Q8NH10 309 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 MRPL37Q9BZE1 423 aaKnown RBP8.95□□□□□ -0.98
VPS11-208ENST00000621676 LINC00470Q9BZP3 86 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 FN3KRPQ9HA64 309 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 OR2S2Q9NQN1 319 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 DISC1C4P0D8 188 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms