RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PARS2Q7L3T8 475 aaKnown RBP4.46□□□□□ -1.7
VPS13D-214ENST00000620676 VASH2Q86V25 355 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 SDF2Q99470 211 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 TRBV11-1A0A0K0K1C0 115 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 A0A0U1RQF3 1178 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 TRAPPC2LH3BP13 241 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 ISLRO14498 428 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 HOXC12P31275 282 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 PLGLAQ15195 96 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 C1QL3Q5VWW1 255 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 OR8B3Q8NGG8 313 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 SRSF8Q9BRL6 282 aaKnown RBP4.46□□□□□ -1.7
VPS13D-214ENST00000620676 KLF16Q9BXK1 252 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-214ENST00000620676 OBP2BQ9NPH6 170 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 MON2Q7Z3U7 1717 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 K7EQM0 130 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 C1orf140Q5VVS0 124 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 UBTD1Q9HAC8 227 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 WNT16Q9UBV4 365 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 CARHSP1Q9Y2V2 147 aaKnown RBP4.46□□□□□ -1.7
VPS13D-214ENST00000620676 MPPED1O15442 326 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 ADCYAP1P18509 176 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 MFAP5Q13361 173 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 TEX38Q6PEX7 206 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 PRSS3P2Q8NHM4 247 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 C2orf88Q9BSF0 95 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 MED29Q9NX70 200 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 TMEM50BP56557 158 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 CKS1BP61024 79 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 CSNK1G2P78368 415 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 NAAAQ02083 359 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 WDR5BQ86VZ2 330 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 TMEM106CQ9BVX2 250 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 ANKRD10Q9NXR5 420 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 MCTS1Q9ULC4 181 aaKnown RBP4.46□□□□□ -1.7
VPS13D-214ENST00000620676 TBL2Q9Y4P3 447 aaKnown RBP4.46□□□□□ -1.7
VPS13D-214ENST00000620676 TRAV36DV7A0A075B6V5 113 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 CD81P60033 236 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 SLC48A1Q6P1K1 146 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 Q8NFD4 153 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 GATAD1Q8WUU5 269 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 TMEM131LA2VDJ0 1609 aa4.46□□□□□ -1.7
VPS13D-214ENST00000620676 HHEXQ03014 270 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 MORN4Q8NDC4 146 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SGMS2Q8NHU3 365 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PTPMT1Q8WUK0 201 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 GDF15Q99988 308 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 RTTNQ86VV8 2226 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PRSS37A4D1T9 235 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 TLCD2A6NGC4 264 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF264O43296 627 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PHOSPHO2Q8TCD6 241 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SIGMAR1Q99720 223 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 TXNIPQ9H3M7 391 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 CLN8Q9UBY8 286 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PIK3C2AO00443 1686 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 IGKV6D-21A0A0A0MT36 114 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 CTDSPLO15194 276 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ERGP11308 486 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PIGYQ3MUY2 71 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SSMEM1Q8WWF3 244 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ASCL3Q9NQ33 180 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 AUP1Q9Y679 476 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 LTBP4Q8N2S1 1624 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 FAM166BA8MTA8 275 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SLC39A11Q8N1S5 342 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 FAM181AQ8N9Y4 354 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 LRRC75AQ8NAA5 344 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 OR2A1Q8NGT9 310 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 FAM131CQ96AQ9 280 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PGLYRP3Q96LB9 341 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SPHK2Q9NRA0 654 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 C3orf85A0A1B0GTC6 90 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SRPXP78539 464 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 TPGS2Q68CL5 300 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ABHD17CQ6PCB6 329 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF547Q8IVP9 402 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ST3GAL6Q9Y274 331 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 TMSB15BA0A087X1C1 80 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PRAMEF25A6NGN4 478 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 DANCRP0C864 163 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 TDGF1P3P51864 188 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PLP2Q04941 152 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 TBC1D26Q86UD7 250 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 OR2C3Q8N628 320 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 RNF126Q9BV68 326 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 A0A1W2PPC1 479 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 CT45A8P0DMV1 189 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 CT45A9P0DMV2 189 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 BRS3P32247 399 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PRDX1Q06830 199 aaKnown RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 CT45A2Q5DJT8 189 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 MBNL1Q9NR56 388 aaKnown RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 B3GAT1Q9P2W7 334 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SIGLEC7Q9Y286 467 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ENTPD2Q9Y5L3 495 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 A0A0G2JLL6 359 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 MYF5P13349 255 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 METAP1P53582 386 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PRRT2Q7Z6L0 340 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms