RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 OR5D18Q8NGL1 313 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 OR5D13Q8NGL4 314 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 FAM216AQ8WUB2 273 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 PHYHIPQ92561 330 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 ORAI1Q96D31 301 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 AJUBAQ96IF1 538 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 CNBD2Q96M20 576 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 JMJD8Q96S16 334 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 PCGF1Q9BSM1 259 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 YTHDF1Q9BYJ9 559 aaKnown RBP6.76□□□□□ -1.33
NEK3-209ENST00000618856 PPIL3Q9H2H8 161 aaKnown RBP6.76□□□□□ -1.33
NEK3-209ENST00000618856 NCOR1P1Q9H4R4 102 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 IFT22Q9H7X7 185 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 METTL8Q9H825 291 aaKnown RBP6.76□□□□□ -1.33
NEK3-209ENST00000618856 OR14J1Q9UGF5 321 aa6.76□□□□□ -1.33
NEK3-209ENST00000618856 SLC33A1O00400 549 aaPredicted RBP6.75□□□□□ -1.33
NEK3-209ENST00000618856 MGST3O14880 152 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 MAGEB3O15480 346 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 OR2H2O95918 312 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 UCHL1P09936 223 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 OCMP0CE72 109 aaPredicted RBP6.75□□□□□ -1.33
NEK3-209ENST00000618856 TMEM225BP0DP42 221 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 PRKACAP17612 351 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 MAPK3P27361 379 aaPredicted RBP6.75□□□□□ -1.33
NEK3-209ENST00000618856 DUSP1P28562 367 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 OR3A4PP47883 348 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 UBE2E1P51965 193 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 RPL31P62899 125 aaKnown RBP6.75□□□□□ -1.33
NEK3-209ENST00000618856 PPP3R1P63098 170 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 SRSF2Q01130 221 aaKnown RBP6.75□□□□□ -1.33
NEK3-209ENST00000618856 ZNF273Q14593 569 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 IL13RA2Q14627 380 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 INSL4Q14641 139 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 MED22Q15528 200 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 ACSM3Q53FZ2 586 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 DDI2Q5TDH0 399 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 GPR157Q5UAW9 335 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 NCR3LG1Q68D85 454 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 FIP1L1Q6UN15 594 aaKnown RBP6.75□□□□□ -1.33
NEK3-209ENST00000618856 BRD3OSQ6XYD6 125 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 Q6YL49 198 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 TMEM91Q6ZNR0 172 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 LRRTM1Q86UE6 522 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 LDLRAD3Q86YD5 345 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 BPIFB2Q8N4F0 458 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 SIGLECL1Q8N7X8 197 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 OR4S1Q8NGB4 309 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 TNFAIP8L1Q8WVP5 186 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 C22orf15Q8WYQ4 148 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 H1FXQ92522 213 aaKnown RBP6.75□□□□□ -1.33
NEK3-209ENST00000618856 CORO2AQ92828 525 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 LHX4Q969G2 390 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 UQCC2Q9BRT2 126 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 ZMAT3Q9HA38 289 aaKnown RBP6.75□□□□□ -1.33
NEK3-209ENST00000618856 NOX4Q9NPH5 578 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 ACOT13Q9NPJ3 140 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 ONECUT1Q9UBC0 465 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 CKLFQ9UBR5 152 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 BLOC1S6Q9UL45 172 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 DSCAML1Q8TD84 2053 aa6.75□□□□□ -1.33
NEK3-209ENST00000618856 IGHV3OR16-10A0A075B7F0 116 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 TRAV24A0A0B4J272 114 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 PNMA8CA0A1B0GUJ8 204 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 A0A1W2PPH5 198 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 SH2D1BO14796 132 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 ZNF780AO75290 641 aaPredicted RBP6.74□□□□□ -1.33
NEK3-209ENST00000618856 INMTO95050 263 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 RNASE1P07998 156 aaKnown RBP6.74□□□□□ -1.33
NEK3-209ENST00000618856 CGB3P0DN86 165 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 CGB7P0DN87 165 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 CALCBP10092 127 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 PSMA1P25786 263 aaKnown RBP6.74□□□□□ -1.33
NEK3-209ENST00000618856 MAP2K4P45985 399 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 COMPP49747 757 aaPredicted RBP6.74□□□□□ -1.33
NEK3-209ENST00000618856 P2RX3P56373 397 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 UBA52P62987 128 aaKnown RBP6.74□□□□□ -1.33
NEK3-209ENST00000618856 GUCA2AQ02747 115 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 EMX1Q04741 257 aaPredicted RBP6.74□□□□□ -1.33
NEK3-209ENST00000618856 TRAM1Q15629 374 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 DEFB112Q30KQ8 113 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 C1orf100Q5SVJ3 147 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 UBE2UQ5VVX9 321 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 LIPKQ5VXJ0 399 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 RUSC1-AS1Q66K80 236 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 CD200R1LQ6Q8B3 271 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 ZNF367Q7RTV3 350 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 LINC00596Q86U02 117 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 TMEM86BQ8N661 226 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 NKAIN3Q8N8D7 197 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 OR4M1Q8NGD0 313 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 UFD1Q92890 307 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 MRPS24Q96EL2 167 aaKnown RBP6.74□□□□□ -1.33
NEK3-209ENST00000618856 MGLLQ99685 303 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 C19orf24Q9BVV8 132 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 MS4A7Q9GZW8 240 aaPredicted RBP6.74□□□□□ -1.33
NEK3-209ENST00000618856 LINC00574Q9H8X3 128 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 EXOSC4Q9NPD3 245 aaKnown RBP6.74□□□□□ -1.33
NEK3-209ENST00000618856 GLS2Q9UI32 602 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 GSTK1Q9Y2Q3 226 aa6.74□□□□□ -1.33
NEK3-209ENST00000618856 LINC00312Q9Y6C7 94 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms