RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 UTS2BQ765I0 119 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 ABHD12Q8N2K0 398 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 OR2G2Q8NGZ5 317 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 RFT1Q96AA3 541 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 FGGYQ96C11 551 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 HMG20AQ9NP66 347 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 EXOSC4Q9NPD3 245 aaKnown RBP16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 GLS2Q9UI32 602 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 GSTK1Q9Y2Q3 226 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 ZNF281Q9Y2X9 895 aa16.62■□□□□ 0.25
TRAPPC3-208ENST00000616074 IGKV1-12A0A0C4DH73 117 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 FAM172BPA6NC97 362 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 ALX3O95076 343 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 OR2H2O95918 312 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 IGKV1D-12P01611 117 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 IGLL1P15814 213 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 ZNF20P17024 532 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 CD33P20138 364 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 PRKACBP22694 351 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 GDNFP39905 211 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 CDC42P60953 191 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 PDZK1IP1Q13113 114 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 C16orf82Q7Z2V1 217 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 RNF144BQ7Z419 303 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 RFKQ969G6 155 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 OPALINQ96PE5 141 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 GAL3ST2Q9H3Q3 398 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 LIN7BQ9HAP6 207 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 FRRS1LQ9P0K9 344 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 DPM3Q9P2X0 92 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 OAZ3Q9UMX2 235 aa16.61■□□□□ 0.25
TRAPPC3-208ENST00000616074 TRGV10A0A0A0MS01 117 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 H3BUI4 141 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 CDK2P24941 298 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 NANOS3P60323 173 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 BDH1Q02338 343 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 TCTEX1D4Q5JR98 221 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 OR52W1Q6IF63 320 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 HEPN1Q6WQI6 88 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 RTN4RL2Q86UN3 420 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 WFDC9Q8NEX5 89 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 SPSB1Q96BD6 273 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 SPACA5Q96QH8 159 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 MBOAT4Q96T53 435 aa16.6■□□□□ 0.25
TRAPPC3-208ENST00000616074 SH2D1BO14796 132 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 KDM4BO94953 1096 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 IGLV1-47P01700 117 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 ISG15P05161 165 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 PF4V1P10720 104 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 FCGR1AP12314 374 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 GLIPR1P48060 266 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 AESQ08117 197 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 BNIP1Q12981 228 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 ABCA11PQ4W5N1 156 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 C1orf146Q5VVC0 180 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 CCDC121Q6ZUS5 278 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 CENPVQ7Z7K6 275 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 OR51A4Q8NGJ6 313 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 OR5D18Q8NGL1 313 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 OR10AC1Q8NH08 325 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 ZNF596Q8TC21 504 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 CORO2AQ92828 525 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 STMN2Q93045 179 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 AKR1E2Q96JD6 320 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 SLC25A33Q9BSK2 321 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 OSBPL10Q9BXB5 764 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 COMMD4Q9H0A8 199 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 ZNF286AQ9HBT8 521 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 TAS2R3Q9NYW6 316 aa16.59■□□□□ 0.25
TRAPPC3-208ENST00000616074 LPLP06858 475 aa16.58■□□□□ 0.24
TRAPPC3-208ENST00000616074 BRS3P32247 399 aa16.58■□□□□ 0.24
TRAPPC3-208ENST00000616074 FDX2Q6P4F2 183 aa16.58■□□□□ 0.24
TRAPPC3-208ENST00000616074 OR13C9Q8NGT0 318 aa16.58■□□□□ 0.24
TRAPPC3-208ENST00000616074 CAPSLQ8WWF8 208 aa16.58■□□□□ 0.24
TRAPPC3-208ENST00000616074 TCRBV4S1A1TA0A5B7 111 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 FUOMA2VDF0 154 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 SH2D7A6NKC9 451 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 SAC3D1A6NKF1 404 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 LEUTXA8MZ59 168 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 J3QRE1 110 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 OR2F2O95006 317 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 OCM2P0CE71 109 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 OCMP0CE72 109 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 ZNF44P15621 663 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 LMO1P25800 156 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 CD34P28906 385 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 C10orf99Q6UWK7 81 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 MYDGFQ969H8 173 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 RNFT2Q96EX2 444 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 CENPNQ96H22 339 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 COQ2Q96H96 371 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 RBM14Q96PK6 669 aaKnown RBP16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 HHLA2Q9UM44 414 aa16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 TSSC4Q9Y5U2 329 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC3-208ENST00000616074 KMT2CQ8NEZ4 4911 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 DAPL1A0PJW8 107 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 ODAMA1E959 279 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 SLC16A6O15403 523 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 PF4P02776 101 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 MT-ND2P03891 347 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms