RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 LILRA5A6NI73 299 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 CD1AP06126 327 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 F2RP25116 425 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 CAMPP49913 170 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 COX19Q49B96 90 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 KMT5CQ86Y97 462 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 B2MP61769 119 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 FCGR3BO75015 233 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 CDS2O95674 445 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 KHDC3LQ587J8 217 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 SPINK9Q5DT21 86 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 PRSS3P2Q8NHM4 247 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 ASB10Q8WXI3 467 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 PLPPR2Q96GM1 343 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 BOD1Q96IK1 185 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 NRTNQ99748 197 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 DEFB127Q9H1M4 99 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 RCC2Q9P258 522 aaKnown RBP16.67■□□□□ 0.26
SPAST-203ENST00000615843 LOC105371267A0A1B0GV96 52 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 IGFBP7Q16270 282 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 ZNF385CQ66K41 422 aaPredicted RBP16.67■□□□□ 0.26
SPAST-203ENST00000615843 PET117Q6UWS5 81 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 WNT2BQ93097 391 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 TBX15Q96SF7 602 aa16.67■□□□□ 0.26
SPAST-203ENST00000615843 A0A1W2PPC4 97 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 HOXD4P09016 255 aaPredicted RBP16.66■□□□□ 0.26
SPAST-203ENST00000615843 ZNF32P17041 273 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 RPL24P83731 157 aaKnown RBP16.66■□□□□ 0.26
SPAST-203ENST00000615843 ZNF718Q3SXZ3 478 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 C1QL3Q5VWW1 255 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 BCL2L2Q92843 193 aaPredicted RBP16.66■□□□□ 0.26
SPAST-203ENST00000615843 TMEM191AQ9H0A3 160 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 MPTX1A8MV57 137 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 MYOGP15173 224 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 HTR1DP28221 377 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 GPR27Q9NS67 375 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 MTCH2Q9Y6C9 303 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 PSG6Q00889 435 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 CD226Q15762 336 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 RAB24Q969Q5 203 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 NKX2-6A6NCS4 301 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 SLC25A5P05141 298 aaKnown RBP16.66■□□□□ 0.26
SPAST-203ENST00000615843 FGF2P09038 288 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 RPL11P62913 178 aaKnown RBP16.66■□□□□ 0.26
SPAST-203ENST00000615843 OR1L6Q8NGR2 347 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 VN1R17PQ8TDU5 208 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 OR5AC2Q9NZP5 309 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 KIAA1456Q9P272 454 aa16.66■□□□□ 0.26
SPAST-203ENST00000615843 SPTY2D1-AS1A0A0U1RR47 76 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 GLB1P16278 677 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 RHOVQ96L33 236 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 CIDEAO60543 219 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 RPL13AP40429 203 aaKnown RBP16.65■□□□□ 0.26
SPAST-203ENST00000615843 MDH2P40926 338 aaKnown RBP16.65■□□□□ 0.26
SPAST-203ENST00000615843 COL5A1-AS1Q5SY13 56 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 OR5D13Q8NGL4 314 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 MENTQ9BUN1 341 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 PPYP01298 95 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 TCL1AP56279 114 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 HIST3H3Q16695 136 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 CYB561D1Q8N8Q1 229 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 FAM181AQ8N9Y4 354 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 OR2D2Q9H210 308 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 SERGEFQ9UGK8 458 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
SPAST-203ENST00000615843 TRBV23-1A0A0A0MS06 115 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 OR2J3O76001 311 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 TRGC2P03986 189 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 GAPDHP04406 335 aaKnown RBP16.65■□□□□ 0.26
SPAST-203ENST00000615843 MDKP21741 143 aaPredicted RBP16.65■□□□□ 0.26
SPAST-203ENST00000615843 DDTP30046 118 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 GGTLC2Q14390 218 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 RFLNBQ8N5W9 214 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 OIT3Q8WWZ8 545 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 COX14Q96I36 57 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 SDHCQ99643 169 aaPredicted RBP16.65■□□□□ 0.26
SPAST-203ENST00000615843 PSG11Q9UQ72 335 aa16.65■□□□□ 0.26
SPAST-203ENST00000615843 TRIP11Q15643 1979 aa16.64■□□□□ 0.26
SPAST-203ENST00000615843 TMEM255AQ5JRV8 349 aa16.64■□□□□ 0.26
SPAST-203ENST00000615843 C6orf15Q6UXA7 325 aaPredicted RBP16.64■□□□□ 0.26
SPAST-203ENST00000615843 ZAR1Q86SH2 424 aa16.64■□□□□ 0.26
SPAST-203ENST00000615843 ZNF205O95201 554 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 RPS4Y1P22090 263 aaKnown RBP16.64■□□□□ 0.25
SPAST-203ENST00000615843 Q1RN00 199 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 Q5BKY6 102 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 GAPTQ8N292 157 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 PTX4Q96A99 478 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 PTP4A3O75365 173 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 SH2D2AQ9NP31 389 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 DSPPQ9NZW4 1301 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 PAGE4O60829 102 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 FAM3BP58499 235 aaPredicted RBP16.64■□□□□ 0.25
SPAST-203ENST00000615843 MRPL30Q8TCC3 161 aaKnown RBP16.64■□□□□ 0.25
SPAST-203ENST00000615843 OR1A1Q9P1Q5 309 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 KIF13BQ9NQT8 1826 aa16.64■□□□□ 0.25
SPAST-203ENST00000615843 GCM2O75603 506 aaPredicted RBP16.63■□□□□ 0.25
SPAST-203ENST00000615843 SCGB1C2P0DMR2 95 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 TMEM97Q5BJF2 176 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 ANKRD33Q7Z3H0 272 aa16.63■□□□□ 0.25
SPAST-203ENST00000615843 SLC35E3Q7Z769 313 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms