RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZNF154Q13106 437 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 TGIF2-C20orf24A0A0A6YYL0 155 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 A0A1W2PQM1 296 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 IGSF23A1L1A6 192 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 P2RY1P47900 373 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF92Q03936 586 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 LIAT1Q6ZQX7 453 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 CYB561D1Q8N8Q1 229 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 OR51H1Q8NH63 302 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 TMEM171Q8WVE6 324 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 PP6455Q8WZ26 134 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 FOXI3A8MTJ6 420 aaPredicted RBP17.68■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF724A8MTY0 619 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 TERTO14746 1132 aaKnown RBP17.68■□□□□ 0.42
SSBP3-216ENST00000610401 FGF8P55075 233 aaPredicted RBP17.68■□□□□ 0.42
SSBP3-216ENST00000610401 VAMP2P63027 116 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 Q6ZPA2 131 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 SSC4DQ8WTU2 575 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 TCTEX1D2Q8WW35 142 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 UCK1Q9HA47 277 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 PLEKHA2Q9HB19 425 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 SLC7A10Q9NS82 523 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 TUBD1Q9UJT1 453 aa17.68■□□□□ 0.42
SSBP3-216ENST00000610401 PTRH2Q9Y3E5 179 aaKnown RBP17.68■□□□□ 0.42
SSBP3-216ENST00000610401 ZFP92A6NM28 416 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 HMGB3O15347 200 aaKnown RBP17.67■□□□□ 0.42
SSBP3-216ENST00000610401 GPR137BO60478 399 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 NABP1Q96AH0 204 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 PFDN5Q99471 154 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 CHCHD2Q9Y6H1 151 aaPredicted RBP17.67■□□□□ 0.42
SSBP3-216ENST00000610401 DOCK10Q96BY6 2186 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 A0A0G2JMM0 328 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 A0A1W2PPB8 328 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 A0A1W2PRS3 328 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 KIR3DP1A8MWS1 328 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF587BE7ETH6 402 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 UBE2CO00762 179 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 AGAP20933 346 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 OR1J1Q8NGS3 322 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 RHBDD1Q8TEB9 315 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 IL1F10Q8WWZ1 152 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 DOCK11Q5JSL3 2073 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 H3BQ15 152 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 EIF1BO60739 113 aaKnown RBP17.67■□□□□ 0.42
SSBP3-216ENST00000610401 IGLV3-19P01714 112 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 SCTP09683 121 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF16P17020 682 aaPredicted RBP17.67■□□□□ 0.42
SSBP3-216ENST00000610401 CCL1P22362 96 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 CHATP28329 748 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 EIF1P41567 113 aaKnown RBP17.67■□□□□ 0.42
SSBP3-216ENST00000610401 SUMO3P55854 103 aaPredicted RBP17.67■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF239Q16600 458 aaKnown RBP17.67■□□□□ 0.42
SSBP3-216ENST00000610401 OSR2Q8N2R0 312 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 GPR137CQ8N3F9 429 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 OR2C3Q8N628 320 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 RNASE11Q8TAA1 199 aaKnown RBP17.67■□□□□ 0.42
SSBP3-216ENST00000610401 RAB39BQ96DA2 213 aa17.67■□□□□ 0.42
SSBP3-216ENST00000610401 AP4M1O00189 453 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 WRBO00258 174 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 CYB5BO43169 146 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 CXCL1P09341 107 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 NKX2-1P43699 371 aaPredicted RBP17.66■□□□□ 0.42
SSBP3-216ENST00000610401 RND3P61587 244 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 RPS16P62249 146 aaKnown RBP17.66■□□□□ 0.42
SSBP3-216ENST00000610401 FAM189A2Q15884 450 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 LGI3Q8N145 548 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF488Q96MN9 340 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 NUDT16L1Q9BRJ7 211 aaKnown RBP17.66■□□□□ 0.42
SSBP3-216ENST00000610401 PBDC1Q9BVG4 233 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 GAPDHP04406 335 aaKnown RBP17.66■□□□□ 0.42
SSBP3-216ENST00000610401 CD63P08962 238 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF84P51523 738 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 DYNLT3P51808 116 aa17.66■□□□□ 0.42
SSBP3-216ENST00000610401 TMEM267Q0VDI3 215 aaPredicted RBP17.66■□□□□ 0.42
SSBP3-216ENST00000610401 MAML2Q8IZL2 1156 aaPredicted RBP17.66■□□□□ 0.42
SSBP3-216ENST00000610401 AFF3P51826 1226 aaKnown RBP17.65■□□□□ 0.42
SSBP3-216ENST00000610401 MSI2Q96DH6 328 aaKnown RBP17.65■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF286AQ9HBT8 521 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 GNG13Q9P2W3 67 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 ZMAT5Q9UDW3 170 aaKnown RBP17.65■□□□□ 0.42
SSBP3-216ENST00000610401 PRR14LQ5THK1 2151 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 CXCL13O43927 109 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 SMIM6P0DI80 62 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 EIF2S3P41091 472 aaKnown RBP17.65■□□□□ 0.42
SSBP3-216ENST00000610401 MALLQ13021 153 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 HLA-BQ31612 363 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 LCN15Q6UWW0 184 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 SPNS3Q6ZMD2 512 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 TBC1D26Q86UD7 250 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 OR10D4PQ8NGN7 298 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 OR14L1PQ8NHC6 308 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 CCDC74BQ96LY2 380 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 SCRT1Q9BWW7 348 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 V9GYS6 101 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 C3orf85A0A1B0GTC6 90 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 NPIPB13A6NJU9 1138 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 NPIPB4C9JG80 1138 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 HS3ST1O14792 307 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF133P52736 654 aaPredicted RBP17.65■□□□□ 0.42
SSBP3-216ENST00000610401 GAPTQ8N292 157 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms