RNA–Protein interactions for RNA: ENST00000606671.5

ZEB1-225, Transcript of zinc finger E-box binding homeobox 1, human

TSL 4

Gene ZEB1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-225	ENST00000606671	CHTF8	P0CG12	524 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	PET100	P0DJ07	73 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	PPIAL4F	P0DN26	164 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	NCK1	P16333	377 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	HLA-DMA	P28067	261 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	GTF2E2	P29084	291 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	DDOST	P39656	456 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	RPL13A	P40429	203 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	VDAC2	P45880	294 aa	Predicted RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	RPS10	P46783	165 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	MRPL19	P49406	292 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	ERF	P50548	548 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	ATP5J2	P56134	94 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	AP1S2	P56377	157 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	ADARB1	P78563	741 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	NRF1	Q16656	503 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	COX19	Q49B96	90 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	C6orf226	Q5I0X4	101 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	SAMD4B	Q5PRF9	694 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	TPRG1L	Q5T0D9	272 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	OR4F3	Q6IEY1	312 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	OR2A2	Q6IF42	318 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	ULK3	Q6PHR2	472 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	LRRN1	Q6UXK5	716 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671		Q6ZS92	163 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	MRPL21	Q7Z2W9	205 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	TMEM135	Q86UB9	458 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	FUNDC1	Q8IVP5	155 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	ZFP82	Q8N141	532 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	PDIK1L	Q8N165	341 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	FAM71E2	Q8N5Q1	922 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	UBL4B	Q8N7F7	174 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	OR2D3	Q8NGH3	330 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	OR56A4	Q8NGH8	313 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	OR9G4	Q8NGQ1	327 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	OR2L8	Q8NGY9	312 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	OR9G1	Q8NH87	305 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	KCTD4	Q8WVF5	259 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	PIH1D2	Q8WWB5	315 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	BORCS5	Q969J3	196 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	TM4SF19	Q96DZ7	209 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	WFIKKN1	Q96NZ8	548 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	OXGR1	Q96P68	337 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	IP6K3	Q96PC2	410 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	TSSK3	Q96PN8	268 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	SLC38A2	Q96QD8	506 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	PRRT1	Q99946	306 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	COPS4	Q9BT78	406 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	NUDT9	Q9BW91	350 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	ULBP1	Q9BZM6	244 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	ZYG11B	Q9C0D3	744 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	GID8	Q9NWU2	228 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	LYAR	Q9NX58	379 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	THUMPD1	Q9NXG2	353 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	STMN3	Q9NZ72	180 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	CCDC59	Q9P031	241 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	SLC22A13	Q9Y226	551 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	FARSA	Q9Y285	508 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	TBL2	Q9Y4P3	447 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	POLR3H	Q9Y535	204 aa	Predicted RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	FLNA	P21333	2647 aa	Known RBP	2.57	□□□□□ -2
ZEB1-225	ENST00000606671	ARHGAP21	Q5T5U3	1957 aa		2.57	□□□□□ -2
ZEB1-225	ENST00000606671	CHD5	Q8TDI0	1954 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	TRBV11-1	A0A0K0K1C0	115 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	TCRBV9S1A1T	A0A576	114 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	ZNF729	A6NN14	1252 aa	Predicted RBP	2.56	□□□□□ -2
ZEB1-225	ENST00000606671	LOC110117498-PIK3R3	F6TDL0	507 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671		M0R036	132 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	CCL21	O00585	134 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	DLGAP1	O14490	977 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	RFXANK	O14593	260 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	GOSR2	O14653	212 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	AGPAT2	O15120	278 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	CLOCK	O15516	846 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	SNAI2	O43623	268 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	ENTPD5	O75356	428 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	ADAP1	O75689	374 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	SRP72	O76094	671 aa	Known RBP	2.56	□□□□□ -2
ZEB1-225	ENST00000606671	PSMG1	O95456	288 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	OXSR1	O95747	527 aa	Predicted RBP	2.56	□□□□□ -2
ZEB1-225	ENST00000606671	FGG	P02679	453 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	FGF1	P05230	155 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	KLK3	P07288	261 aa	Predicted RBP	2.56	□□□□□ -2
ZEB1-225	ENST00000606671	UBC	P0CG48	685 aa	Known RBP	2.56	□□□□□ -2
ZEB1-225	ENST00000606671	SMIM10L1	P0DMW3	83 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	SLC2A1	P11166	492 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	PGAM1	P18669	254 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	STOM	P27105	288 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	CRABP1	P29762	137 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	KDELR2	P33947	212 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	CEACAM3	P40198	252 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	MAGEA3	P43357	314 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	GSS	P48637	474 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	RGS6	P49758	472 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	DLX1	P56177	255 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	PSME3	P61289	254 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	ERVK-25	P63136	954 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	FLI1	Q01543	452 aa	Predicted RBP	2.56	□□□□□ -2
ZEB1-225	ENST00000606671	RAD51	Q06609	339 aa		2.56	□□□□□ -2
ZEB1-225	ENST00000606671	ADIG	Q0VDE8	80 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms