RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PLET1Q6UQ28 207 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 ACP7Q6ZNF0 438 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 OR11L1Q8NGX0 322 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 NEK7Q8TDX7 302 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 FBXW5Q969U6 566 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 ST6GALNAC5Q9BVH7 336 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 GCM1Q9NP62 436 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 COPZ2Q9P299 210 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 NLKQ9UBE8 527 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 KNG1P01042 644 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 TBPP20226 339 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 HLA-DMAP28067 261 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 MST1LQ2TV78 715 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 SPRNQ5BIV9 151 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 CACNG6Q9BXT2 260 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 WDR13Q9H1Z4 485 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 ZNF701Q9NV72 531 aaPredicted RBP15.18■□□□□ 0.02
VRK3-225ENST00000601912 FAIMQ9NVQ4 179 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 RNF7Q9UBF6 113 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 ANAPC10Q9UM13 185 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 PPP1R3CQ9UQK1 317 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 NPTNQ9Y639 398 aa15.18■□□□□ 0.02
VRK3-225ENST00000601912 ZNF462Q96JM2 2506 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 SRRM5B3KS81 715 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 C3orf80F5H4A9 247 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 HS3ST1O14792 307 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 WNT9BO14905 357 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 RAB3DO95716 219 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 IRF2P14316 349 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 NAT1P18440 290 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 DTYMKP23919 212 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 GIFP27352 417 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 BTCP35070 178 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 MEF2DQ14814 521 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 SWI5Q1ZZU3 235 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 Q6P435 159 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 HOGA1Q86XE5 327 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 FAM90A1Q86YD7 464 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 SUMF2Q8NBJ7 301 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 OR4S1Q8NGB4 309 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 OR4C16Q8NGL9 310 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 Q8TCH9 128 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 HPS1Q92902 700 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 DPCDQ9BVM2 203 aaPredicted RBP15.17■□□□□ 0.02
VRK3-225ENST00000601912 CHST6Q9GZX3 395 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 SAP30LQ9HAJ7 183 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 C12orf4Q9NQ89 552 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 OR14J1Q9UGF5 321 aa15.17■□□□□ 0.02
VRK3-225ENST00000601912 FBXO9Q9UK97 447 aaPredicted RBP15.17■□□□□ 0.02
VRK3-225ENST00000601912 CHD3Q12873 2000 aaKnown RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 OR2H2O95918 312 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 HAND1O96004 215 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 CD74P04233 296 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 PLA1AQ53H76 456 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 ACTBL2Q562R1 376 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 RNASE10Q5GAN6 216 aaKnown RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 SFRP4Q6FHJ7 346 aaPredicted RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 OR52W1Q6IF63 320 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 ZNF782Q6ZMW2 699 aaPredicted RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 ZCCHC24Q8N2G6 241 aaKnown RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 RDH5Q92781 318 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 CYYR1Q96J86 154 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 MMP28Q9H239 520 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 DNAJB11Q9UBS4 358 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 EDARQ9UNE0 448 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 KLF2Q9Y5W3 355 aaPredicted RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 hCG_2014768A0A024R1R8 64 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 TRAV24A0A0B4J272 114 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 LRRC30A6NM36 301 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 HSPB6O14558 160 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 LHBP01229 141 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 AMY2BP19961 511 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 FAAP20Q6NZ36 180 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 MEX3BQ6ZN04 569 aaKnown RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 GCSAMQ8N6F7 178 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 BOLLQ8N9W6 283 aaKnown RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 BEST4Q8NFU0 473 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 OR4K15Q8NH41 348 aa15.16■□□□□ 0.02
VRK3-225ENST00000601912 HDHD3Q9BSH5 251 aaPredicted RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 RIMS4Q9H426 269 aaPredicted RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 CHMP1AQ9HD42 196 aaPredicted RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 ZNF230Q9UIE0 474 aaPredicted RBP15.16■□□□□ 0.02
VRK3-225ENST00000601912 PKDREJQ9NTG1 2253 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 IFNL4K9M1U5 179 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 SIRPB1O00241 398 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 CCR6P51684 374 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 TAS2R46P59540 309 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 PAN3Q58A45 887 aaKnown RBP15.15■□□□□ 0.02
VRK3-225ENST00000601912 AGAP6Q5VW22 663 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 BPIFB2Q8N4F0 458 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 OR4D10Q8NGI6 311 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 DYRK2Q92630 601 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 SNAPC3Q92966 411 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 ETAA1Q9NY74 926 aa15.15■□□□□ 0.02
VRK3-225ENST00000601912 ABCA4P78363 2273 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 RFPL4AA6NLU0 287 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 DISC1C4P0D8 188 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 RFPL4AL1F8VTS6 287 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 M0QYG6 137 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 SLC33A1O00400 549 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms