RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 COX7A1P24310 79 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 IER3P46695 156 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 MTNR1BP49286 362 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 RSU1Q15404 277 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 C17orf107Q6ZR85 190 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 TNFAIP8L1Q8WVP5 186 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 GGHQ92820 318 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 TNFRSF14Q92956 283 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 TMEM106AQ96A25 262 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 ZNF747Q9BV97 191 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 GAL3ST2Q9H3Q3 398 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 TMEM138Q9NPI0 162 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 PLCXD1Q9NUJ7 323 aa11.57□□□□□ -0.56
LIG1-218ENST00000599322 TRGV10A0A0A0MS01 117 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 OGG1O15527 345 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 GPR137BO60478 399 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 CSTBP04080 98 aaKnown RBP11.56□□□□□ -0.56
LIG1-218ENST00000599322 ALDOBP05062 364 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 CALCBP10092 127 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 CCL3L1P16619 93 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 RAG2P55895 527 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
LIG1-218ENST00000599322 DYNC1I2Q13409 638 aaKnown RBP11.56□□□□□ -0.56
LIG1-218ENST00000599322 YIF1BQ5BJH7 314 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 DHRS7BQ6IAN0 325 aaPredicted RBP11.56□□□□□ -0.56
LIG1-218ENST00000599322 AHSA2Q719I0 299 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 PNKDQ8N490 385 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 BEND2Q8NDZ0 799 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 PXT1Q8NFP0 134 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 GHSRQ92847 366 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 MYDGFQ969H8 173 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 CHST6Q9GZX3 395 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 RAB18Q9NP72 206 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 ABCB10Q9NRK6 738 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 TAS2R4Q9NYW5 299 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 ZNRD1Q9P1U0 126 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 LINC00312Q9Y6C7 94 aa11.56□□□□□ -0.56
LIG1-218ENST00000599322 TMEM82A0PJX8 343 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 C17orf98A8MV24 154 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 H0YJX3 145 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 OR2H2O95918 312 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 ERP29P30040 261 aaKnown RBP11.55□□□□□ -0.56
LIG1-218ENST00000599322 BDKRB2P30411 391 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 ZNF93P35789 620 aaPredicted RBP11.55□□□□□ -0.56
LIG1-218ENST00000599322 TGFBR2P37173 567 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 P2RX3P56373 397 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 ZNF273Q14593 569 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 Q499Y3 187 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 OR52W1Q6IF63 320 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 ZNF782Q6ZMW2 699 aaPredicted RBP11.55□□□□□ -0.56
LIG1-218ENST00000599322 TFAP2CQ92754 450 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 FOXRED1Q96CU9 486 aaPredicted RBP11.55□□□□□ -0.56
LIG1-218ENST00000599322 NR1H4Q96RI1 486 aaPredicted RBP11.55□□□□□ -0.56
LIG1-218ENST00000599322 METTL9Q9H1A3 318 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 CLEC2DQ9UHP7 191 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 PSORS1C1Q9UIG5 152 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 VPREB3Q9UKI3 123 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 ING4Q9UNL4 249 aa11.55□□□□□ -0.56
LIG1-218ENST00000599322 UBE2J1Q9Y385 318 aaPredicted RBP11.55□□□□□ -0.56
LIG1-218ENST00000599322 TBL2Q9Y4P3 447 aaKnown RBP11.55□□□□□ -0.56
LIG1-218ENST00000599322 ERICH4A6NGS2 130 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 WIPF1O43516 503 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 XPNPEP2O43895 674 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 ZNF780AO75290 641 aaPredicted RBP11.54□□□□□ -0.56
LIG1-218ENST00000599322 NDUFA7O95182 113 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 HTR3BO95264 441 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 ARG1P05089 322 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 GNAO1P09471 354 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 OMGP23515 440 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 MAPK3P27361 379 aaPredicted RBP11.54□□□□□ -0.56
LIG1-218ENST00000599322 DLX1P56177 255 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 WNT4P56705 351 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 RIPK1Q13546 671 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 GPR176Q14439 515 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 AANATQ16613 207 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 LRRC75BQ2VPJ9 315 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 DDI2Q5TDH0 399 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 OR4S1Q8NGB4 309 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 OR52N4Q8NGI2 321 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 SSX3Q99909 188 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 BARHL1Q9BZE3 327 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 SLITRK2Q9H156 845 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 IL36RNQ9UBH0 155 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 TPRKBQ9Y3C4 175 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 MMP24Q9Y5R2 645 aa11.54□□□□□ -0.56
LIG1-218ENST00000599322 IGKV1-12A0A0C4DH73 117 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 CLPSL1A2RUU4 121 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 PTGES3LE9PB15 166 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 IGKV1D-12P01611 117 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 IGHV1-8P0DP01 117 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 CELP19835 753 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 MDKP21741 143 aaPredicted RBP11.53□□□□□ -0.56
LIG1-218ENST00000599322 LMO1P25800 156 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 PTGFRP43088 359 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 HSPA13P48723 471 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 ARHGDIBP52566 201 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 PAN3Q58A45 887 aaKnown RBP11.53□□□□□ -0.56
LIG1-218ENST00000599322 KRBOX4Q5JUW0 171 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 OLFML2AQ68BL7 652 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 DMKNQ6E0U4 476 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms