RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 HRASLS5Q96KN8 279 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 OPALINQ96PE5 141 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 LIN7BQ9HAP6 207 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 RBFOX1Q9NWB1 397 aaKnown RBP15.16■□□□□ 0.02
CCDC43-205ENST00000592333 IMPAD1Q9NX62 359 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 FRRS1LQ9P0K9 344 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 DPM3Q9P2X0 92 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 HHLA2Q9UM44 414 aa15.16■□□□□ 0.02
CCDC43-205ENST00000592333 TRGV10A0A0A0MS01 117 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 SLC16A6O15403 523 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 KDM4BO94953 1096 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 APOL3O95236 402 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 CD28P10747 220 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 BCL3P20749 454 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 OR3A1P47881 315 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 SNRPGP62308 76 aaKnown RBP15.15■□□□□ 0.02
CCDC43-205ENST00000592333 HABP2Q14520 560 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-205ENST00000592333 PLA1AQ53H76 456 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 TMEM219Q86XT9 240 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 RDH10Q8IZV5 341 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 OR4P4Q8NGL7 312 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 NDNFQ8TB73 568 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 FGGYQ96C11 551 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 COMMD4Q9H0A8 199 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 EXOSC4Q9NPD3 245 aaKnown RBP15.15■□□□□ 0.02
CCDC43-205ENST00000592333 HILPDAQ9Y5L2 63 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 ORC6Q9Y5N6 252 aa15.15■□□□□ 0.02
CCDC43-205ENST00000592333 DAPL1A0PJW8 107 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 OCM2P0CE71 109 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 OCMP0CE72 109 aaPredicted RBP15.14■□□□□ 0.01
CCDC43-205ENST00000592333 PRKACAP17612 351 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 CD34P28906 385 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 CEACAM3P40198 252 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 VDAC2P45880 294 aaPredicted RBP15.14■□□□□ 0.01
CCDC43-205ENST00000592333 POU3F4P49335 361 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 BLCAPP62952 87 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 NSUN5P1Q3KNT7 163 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 TRAPPC6BQ86SZ2 158 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 ABHD12Q8N2K0 398 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 ACBD7Q8N6N7 88 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 TPRX1Q8N7U7 411 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 R3HDM4Q96D70 268 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 OCSTAMPQ9BR26 566 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 CHST6Q9GZX3 395 aa15.14■□□□□ 0.01
CCDC43-205ENST00000592333 A0A087X0M5 115 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 A0A1B0GX30 115 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 ADARB2-AS1A8MUL3 147 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 LEUTXA8MZ59 168 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 OOSP1A8MZH6 123 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 H3BSH0 61 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 INMTO95050 263 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 OR2H2O95918 312 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 IGLV1-47P01700 117 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 ALPLP05186 524 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 HTR1AP08908 422 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 CD83Q01151 205 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 MRPL28Q13084 256 aaKnown RBP15.13■□□□□ 0.01
CCDC43-205ENST00000592333 ARSJQ5FYB0 599 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-205ENST00000592333 WFDC9Q8NEX5 89 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 HAVCR2Q8TDQ0 301 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 CITED2Q99967 270 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-205ENST00000592333 MMP28Q9H239 520 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 NCOR1P1Q9H4R4 102 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 IL36RNQ9UBH0 155 aa15.13■□□□□ 0.01
CCDC43-205ENST00000592333 EXOGQ9Y2C4 368 aaKnown RBP15.13■□□□□ 0.01
CCDC43-205ENST00000592333 E9PQ18 207 aa15.12■□□□□ 0.01
CCDC43-205ENST00000592333 CIB2O75838 187 aa15.12■□□□□ 0.01
CCDC43-205ENST00000592333 DBTP11182 482 aaKnown RBP15.12■□□□□ 0.01
CCDC43-205ENST00000592333 SYS1Q8N2H4 156 aa15.12■□□□□ 0.01
CCDC43-205ENST00000592333 CAPSLQ8WWF8 208 aa15.12■□□□□ 0.01
CCDC43-205ENST00000592333 STMN2Q93045 179 aa15.12■□□□□ 0.01
CCDC43-205ENST00000592333 RNFT2Q96EX2 444 aa15.12■□□□□ 0.01
CCDC43-205ENST00000592333 NECAP2Q9NVZ3 263 aa15.12■□□□□ 0.01
CCDC43-205ENST00000592333 ZNF281Q9Y2X9 895 aa15.12■□□□□ 0.01
CCDC43-205ENST00000592333 MEX3AA1L020 520 aaKnown RBP15.11■□□□□ 0.01
CCDC43-205ENST00000592333 OR4C45A6NMZ5 311 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 M0QZK8 103 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 CDK2P24941 298 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 DUSP1P28562 367 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 PRRX1P54821 245 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 NANOS3P60323 173 aaKnown RBP15.11■□□□□ 0.01
CCDC43-205ENST00000592333 KPNB1Q14974 876 aaKnown RBP15.11■□□□□ 0.01
CCDC43-205ENST00000592333 CCDC144NLQ6NUI1 221 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 OR5AU1Q8NGC0 362 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 OR5D14Q8NGL3 314 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 OR13C3Q8NGS6 347 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 CPNE2Q96FN4 548 aaPredicted RBP15.11■□□□□ 0.01
CCDC43-205ENST00000592333 ZCCHC4Q9H5U6 513 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 PCDHB16Q9NRJ7 776 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 OR6C3Q9NZP0 311 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 GSTK1Q9Y2Q3 226 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 BOLA1Q9Y3E2 137 aa15.11■□□□□ 0.01
CCDC43-205ENST00000592333 IGKV1-12A0A0C4DH73 117 aa15.1■□□□□ 0.01
CCDC43-205ENST00000592333 ZNF729A6NN14 1252 aaPredicted RBP15.1■□□□□ 0.01
CCDC43-205ENST00000592333 SIRPB1O00241 398 aa15.1■□□□□ 0.01
CCDC43-205ENST00000592333 OR2F2O95006 317 aa15.1■□□□□ 0.01
CCDC43-205ENST00000592333 IGKV1D-12P01611 117 aa15.1■□□□□ 0.01
CCDC43-205ENST00000592333 ALKBH1Q13686 389 aaKnown RBP15.1■□□□□ 0.01
CCDC43-205ENST00000592333 Q6ZPA2 131 aa15.1■□□□□ 0.01
CCDC43-205ENST00000592333 SERPINA12Q8IW75 414 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms